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SCN18_14_9_16_R2_B_scaffold_1661_5

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(2349..2543)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 59.0
  • Bit_score: 97
  • Evalue 4.00e-18
Ribonuclease VapC n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4T9G2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 59.0
  • Bit_score: 97
  • Evalue 2.90e-18
nitrogen regulatory protein (NtrR-like) virulence associated protein (vap) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 60.0
  • Bit_score: 58
  • Evalue 7.10e-07

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
GTGAACAGGTGGCACGAGAACGAGGAGAAGATAGCTCTCTTCATCGCTTCCGGCGGACTTGCGTTGATCGATTTCAACGAACCCGATGCAGAAGAGGCCGCAGACATTCGGGCCTATCTGAGAAGGCAAGGCACGCCCATCGGTCCCTGTGATGTGCTGATCGCCGCTCAGGCACGCAAGCGGGCACTGTGCTGA
PROTEIN sequence
Length: 65
VNRWHENEEKIALFIASGGLALIDFNEPDAEEAADIRAYLRRQGTPIGPCDVLIAAQARKRALC*