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SCN18_14_9_16_R2_B_scaffold_1229_4

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 3292..3489

Top 3 Functional Annotations

Value Algorithm Source
Phage transcriptional regulator AlpA n=1 Tax=Pseudomonas putida ND6 RepID=I3UT15_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 59.0
  • Bit_score: 62
  • Evalue 1.40e-07
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 59.0
  • Bit_score: 62
  • Evalue 3.80e-08
AlpA family transcriptional regulator {ECO:0000313|EMBL:KIY37745.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 59.0
  • Bit_score: 62
  • Evalue 1.90e-07

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGAATGGTTTCGAAAACGAACGCCTTATCCGTCTGGATGAAGTCGAACGCCTTGTAGGCCTCAAGCATTCCACAATCTATCTGCTGATCCAGTCCGGGGAATTTCCCCGCCAGATTCCCGTAACCAAGCGCTCCGTGCGCTGGCGCTTGTCGGAAATTCAGCGCTGGATCGAAGAACGCGCCGCTCTTGCCGCCTGA
PROTEIN sequence
Length: 66
MNGFENERLIRLDEVERLVGLKHSTIYLLIQSGEFPRQIPVTKRSVRWRLSEIQRWIEERAALAA*