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SCN18_26_2_15_R1_B_scaffold_1094

Search features with annotation key words

Displaying items 31-48 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1094_31
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27546..28055
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXB2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY79927.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1094_32
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28080..28940)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LJ4_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07190.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_26_2_15_R1_B_scaffold_1094_33
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28937..29764)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LJ5_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07189.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_26_2_15_R1_B_scaffold_1094_34
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29972..30187
DNA (216bp) protein (72aa)
Excisionase/Xis, DNA-binding protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SW03_NITWN
Uncharacterized protein {ECO:0000313|EMBL:GAN81428.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
excisionase
SCN18_26_2_15_R1_B_scaffold_1094_35
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30263..33352
DNA (3090bp) protein (1030aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000366D5C3
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:AJX16031.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
type III restriction enzyme, res subunit
SCN18_26_2_15_R1_B_scaffold_1094_36
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33349..34461
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PMV1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42412.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1094_37
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34461..37325
DNA (2865bp) protein (955aa)
Modification methylase DpnIIB {ECO:0000313|EMBL:AKH41639.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AKH41639.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0002FC211F
DNA methylase N-4/N-6
SCN18_26_2_15_R1_B_scaffold_1094_38
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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37335..39443
DNA (2109bp) protein (703aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037123A9
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1094_39
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39709..39978)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKZ8_RHOPX
GNAT family acetyltransferase {ECO:0000313|EMBL:KIZ43305.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1094_40
unknown

Not on your lists

40382..40681
DNA (300bp) protein (100aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1094_41
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40644..42155
DNA (1512bp) protein (504aa)
Adenylate cyclase (EC:4.6.1.1)
UPI0003CF4EA5 related cluster n=1 Tax=unknown RepID=UPI0003CF4EA5
Uncharacterized protein {ECO:0000313|EMBL:ESY74111.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCN18_26_2_15_R1_B_scaffold_1094_42
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42176..42913)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000303515C
Uncharacterized protein {ECO:0000313|EMBL:EZQ13060.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1094_43
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42957..43994)
DNA (1038bp) protein (346aa)
Xylulose kinase XylB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG77_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY47302.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_26_2_15_R1_B_scaffold_1094_44
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44047..44493)
DNA (447bp) protein (149aa)
Pentulose/hexulose kinase {ECO:0000313|EMBL:AKI02663.1}; EC=2.7.1.17 {ECO:0000313|EMBL:AKI02663.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
Xylulose kinase XylB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG77_9RHIZ
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1094_45
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44605..45828
DNA (1224bp) protein (408aa)
membrane protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036F0F35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM28938.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCN18_26_2_15_R1_B_scaffold_1094_46
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45909..47024
DNA (1116bp) protein (372aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
anhydro-N-acetylmuramic acid kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI000373A38C
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1094_47
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47036..47482)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C1C72
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_64_37
SCN18_26_2_15_R1_B_scaffold_1094_48
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47685..48254
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3W6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13580.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SH3 type 3 domain-containing protein
Displaying items 31-48 of 48 in total

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