ggKbase home page

SCN18_26_2_15_R1_B_scaffold_635_27

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32210..33280

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transport ATP-binding protein AppF n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDX3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 353.0
  • Bit_score: 332
  • Evalue 2.90e-88
Oligopeptide transport ATP-binding protein AppF {ECO:0000313|EMBL:CCH22020.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 353.0
  • Bit_score: 332
  • Evalue 4.10e-88
oligopeptide/dipeptide ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 345.0
  • Bit_score: 322
  • Evalue 1.50e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGCAGCCCGCCGGAGAAGAGCATCCGATCCTCGATCTGCGCGACCTGCGCGTCACGTACCGGATTCGCAAGCCGGGGCGGTTCTGGATCCGGAAGGCGGAGCTTCATGCTGTTCAAGGCGTGTCGCTTTCGCTGCGGCGTGGCCGGTCCCTGGGCCTGGTCGGGGAATCCGGATCGGGGAAGAGCACGATCGCCCGCGCCGTGATGGGCCTGACGCCGGTGCGGTCCGGTCGATTGCTGCTGGACGGAACGGACATTACGGCACGCGAGGGCGCGGCGCGCTCCGCCAGCCGGCATCGCCTTCAGATGGTCTTCCAGAACCCCTATTCGAGCCTCAATCCGATGATGACGGTTCACGACATCGTCGCCGAGCCGCTGCGGATCTTCGCCCCCGGGGACAAGGGCAGCCATGCGAGACGGGTGCAGGAAATGCTGGACGCGGTGCACCTGCCGCGCGACGCCGCGCAGCGGTTTCCGCACCAGTTCAGCGGCGGGCAGCGGCAGCGCATCGCCATAGCGCGGGCGCTCGTGCTGCGTCCGGAAGTGATCATCGCGGACGAGCCGACCAGCGCCCTCGACGTCTCGATCCAGGCGCAGATCATGAATCTCCTCACCGAGATCCGGAAGGAGCGGAAGCTCTCCTATCTGGTCATCAGCCACGACCTCGCGGCGATCCGTTACCTTTGCGACGATGTGGCCGTCATGTATCTGGGCGGGATCGTCGAGCAGGGTCCGACGCGCGACGTCTTCTCGGCGCCACGGCATCCCTATACCAAAGCCCTTCTTTCGTCCGTTCGCACCATCCAGGAGGTGACGGACAAAGGCCGGCCCGACCGGCGCATTCTCCTGAAGGGCGATCTGCCGAGCCCGCTGTCTCCTCCCTCGGGTTGCCGTTTCCACACCCGCTGCTGGTGGCGGCGCGAAATCGGAAACCCGCAGCGCTGCGTGGACGAGGCGCCTCTTCTCCGGTCGGACGGTGCTGGAGCCGTGGCCTGCCACTTCAGCGACGGCTCTGCGCCTCACGCGAACCCACCTCCGGCAGCAGCCGAAGCGCAAGGACGAGCGTCGTGA
PROTEIN sequence
Length: 357
MQPAGEEHPILDLRDLRVTYRIRKPGRFWIRKAELHAVQGVSLSLRRGRSLGLVGESGSGKSTIARAVMGLTPVRSGRLLLDGTDITAREGAARSASRHRLQMVFQNPYSSLNPMMTVHDIVAEPLRIFAPGDKGSHARRVQEMLDAVHLPRDAAQRFPHQFSGGQRQRIAIARALVLRPEVIIADEPTSALDVSIQAQIMNLLTEIRKERKLSYLVISHDLAAIRYLCDDVAVMYLGGIVEQGPTRDVFSAPRHPYTKALLSSVRTIQEVTDKGRPDRRILLKGDLPSPLSPPSGCRFHTRCWWRREIGNPQRCVDEAPLLRSDGAGAVACHFSDGSAPHANPPPAAAEAQGRAS*