ggKbase home page

SCN18_26_2_15_R1_B_scaffold_635_45

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 51732..52688

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Pseudomonas nitroreducens RepID=UPI000314BAB8 similarity UNIREF
DB: UNIREF100
  • Identity: 26.4
  • Coverage: 299.0
  • Bit_score: 131
  • Evalue 1.50e-27
Uncharacterized protein {ECO:0000313|EMBL:KGE01875.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 275.0
  • Bit_score: 336
  • Evalue 3.30e-89
ABC-type spermidine/putrescine transport system,permease component I similarity KEGG
DB: KEGG
  • Identity: 28.6
  • Coverage: 290.0
  • Bit_score: 133
  • Evalue 8.60e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGGCGGACGAACCGGGCAAAGTTGAAACTGTCGATGGGAAAGCCATCGCCGGGTATGCCCGCCGCTTTAGCATGACCGCCGCTTCGCCGGAGCGTTTGGCGCAGCCGTCCGCCGACCGGGGATGGAGAGATCGCCTGTTCTACCGGGCATTCACCTTTCCCGCCTTGCTGGTCGTGGCGGGAACGGCAGTCCTGCCGCTCGCGCTCCTGCTGTTCTGGAGCCTCGTCGATCAGCGGTCGGGCGAGGCGACGCTGCGCTACTACGCACAGTCGCTCGCCAGCCCCTACTTCCTGCGCATCCTTCTCACCACCATCCTCATGGCCGCCGGCGTGACCGTCGTGTCGGTCATGCTGGCCCTGCCGATGGCTTACGTCCTGGCACGGCATACATTGCTGCGGAGCATCCTTGTCCCGATGATCAGCATACCGCGAATGCTGCCTTTCGTGGTCGTTGGCTATGCCATGGTGCTGTTGCTGGCGCCCTACACCGGCGTGATGAACAAGGCTCTCATCGCCGCCGGCATCCTGAGCGAACCGGTCTTCATCCTGTTCGGCTGGCCCGGCCAGGCGATCGCGTTCGGCTATGCCGGCGTCGTCATCGCCATAGCCATCCTGACGGGCGTCTTCATGACCGTCGATCCGCAACTGGAAGACGCCGCCGTCACTCTGGGCGCGGGCAGGCTCGAGGCCGCGCTGACCGTCAGCATGCCGCTGGCTGCTCCCGGCATAGTCGCCGCGGCCGCGCTGATCTTCTCGACCGTCGTCACCTCCTATGCGATCCCGGTCATGCTGAACAGCCGTACGCCCTACATGGTGTCGGTGCTCATCTACAACAATCTGTATTCGCTTCAGGAGCGCCACCTCGCCTACGCGCAGGCGATCATCGTCACCGCGCTGGCGATCGGCGTGACGACTGCCGCCCAGATCTTCCTGTCGCGGTTCGGAAGCCGGCGATGA
PROTEIN sequence
Length: 319
MADEPGKVETVDGKAIAGYARRFSMTAASPERLAQPSADRGWRDRLFYRAFTFPALLVVAGTAVLPLALLLFWSLVDQRSGEATLRYYAQSLASPYFLRILLTTILMAAGVTVVSVMLALPMAYVLARHTLLRSILVPMISIPRMLPFVVVGYAMVLLLAPYTGVMNKALIAAGILSEPVFILFGWPGQAIAFGYAGVVIAIAILTGVFMTVDPQLEDAAVTLGAGRLEAALTVSMPLAAPGIVAAAALIFSTVVTSYAIPVMLNSRTPYMVSVLIYNNLYSLQERHLAYAQAIIVTALAIGVTTAAQIFLSRFGSRR*