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SCN18_26_2_15_R1_B_scaffold_603_17

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16068..17765

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003605CC1 similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 565.0
  • Bit_score: 1026
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 563.0
  • Bit_score: 1031
  • Evalue 0.0
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 565.0
  • Bit_score: 1019
  • Evalue 3.10e-295

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGTCACAATCCAACCCAACGCGCGACGATTTCGCCGCGCTCCTCGAAGAATCGTTTTCGGACGGCCATTCCGGCGAAGGCCAGGTCGTGCGCGGCACCGTCACCGGCATCGAGAAGGACATGGCCATCATCGACGTCGGCCTCAAGGTCGAAGGCCGCGTGCCCCTGAAGGAGTTCGGCGCCAAGGCCAAGGACGGCAGCCTGAAGGTCGGCGACACGGTCGAGGTCTATGTCGAGCGCATCGAGAACGCGCTGGGCGAGGCCATGCTGAGCCGCGACAAGGCCCGCCGCGAAGAGAGCTGGGGCAAGCTCGAAGAGAAGTTCGCCAAGGGCGAGCGCGTCGAAGGCATCATCTTCAACCAGGTCAAGGGCGGCTTCACCGTCGATCTCGACGGCGCCGTGGCCTTCCTGCCGCGCAGCCAGGTCGACATCCGGCCGATCCGCGACGTCACGCCGCTCATGCACAACCCGCAGCCCTTCGAGATCCTCAAGATGGATCGCCGCCGCGGCAACATCGTCGTGTCGCGCCGCACCGTGCTCGAAGAGAGCCGCGCCGAGCAGCGCTCGGAGATCGTCCAGAACCTCGAAGAGGGCCAGGTGGTCGAGGGCGTGGTCAAGAACATCACCGACTACGGTGCGTTCGTCGACCTCGGCGGCATCGACGGCCTGCTGCACGTCACCGACATGGCGTGGCGCCGCGTCAACCATCCGACCGAGATCCTCAATATCGGCCAGACGGTGAAGGTGCAGATCATCCGCATCAACCAGGAGACGCACCGCATCTCGCTCGGCATGAAGCAGCTCGAGAGCGATCCGTGGGGCGATATCGGGACGAAGTTCCCGCTCGGCAAGAAGATCCACGGCACGGTCACGAACATCACCGACTACGGTGCGTTCGTCGAGCTGGAGCCGGGCATCGAGGGCCTCATCCACGTCTCGGAGATGAGCTGGACGAAGAAGAACGTGCATCCCGGCAAGATCCTGTCGACCTCGCAGGGCGTCGACGTGGTCGTGCTGGAGGTCGATCCGTCGAAGCGCCGCATCTCGCTCGGCCTCAAGCAGACGCTGGAGAACCCGTGGGATGCCTTCGCCAGCAACCATCCGGTCGGCTCGACCGTCGAGGGCGAGGTCAAGAACAAGACCGAGTTCGGCCTGTTCATCGGCCTCGACGGCGACGTCGACGGCATGGTGCACCTCTCCGACCTCGACTGGACGCGTCCGGGCGAGCAGGTCATCGAGGAGTACCAGAAGGGCCAGATGGTCAAGGCGCAGGTTCTCGACGTCGATGTCGAGAAGGAGCGCATCTCGCTCGGCATCAAGCAGCTCTCGCGTGGCGGCGGCGCCAGCGAGGCGGTCGGCGGCGAACTGCGCAAGAACGCGGTCGTCACCTGCGAAGTGACCGCGATCAAGGACGGCGGCGTGGAAGTGCGTCTGGTCGAATCCGGCCTCGACACCTTCATCAAGCGCTCCGACCTGTCGCGCGACCGCGACGAGCAGCGCCCCGAGCGCTTCACCGTCGGCCAGAAGGTCGACGCGCGCGTCATCGTCTACGACAAGAAGACCCGCAAGGTGCAGGTCTCCATCAAGGCGCTGGAAATCGCCGAGGAGAAGGAAGCGGTCGCCCAGTACGGCTCGACCGACTCCGGCGCTTCGCTGGGCGACATCCTGGGCGCGGCCCTGAAGAAGCAGGGCAGCTAA
PROTEIN sequence
Length: 566
MSQSNPTRDDFAALLEESFSDGHSGEGQVVRGTVTGIEKDMAIIDVGLKVEGRVPLKEFGAKAKDGSLKVGDTVEVYVERIENALGEAMLSRDKARREESWGKLEEKFAKGERVEGIIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDRRRGNIVVSRRTVLEESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPTEILNIGQTVKVQIIRINQETHRISLGMKQLESDPWGDIGTKFPLGKKIHGTVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNVHPGKILSTSQGVDVVVLEVDPSKRRISLGLKQTLENPWDAFASNHPVGSTVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWTRPGEQVIEEYQKGQMVKAQVLDVDVEKERISLGIKQLSRGGGASEAVGGELRKNAVVTCEVTAIKDGGVEVRLVESGLDTFIKRSDLSRDRDEQRPERFTVGQKVDARVIVYDKKTRKVQVSIKALEIAEEKEAVAQYGSTDSGASLGDILGAALKKQGS*