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SCN18_26_2_15_R1_B_scaffold_830_30

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(36140..36367)

Top 3 Functional Annotations

Value Algorithm Source
excisionase n=1 Tax=Meganema perideroedes RepID=UPI00035DF805 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 75.0
  • Bit_score: 144
  • Evalue 3.10e-32
DNA-binding protein {ECO:0000313|EMBL:KIZ47277.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 72.0
  • Bit_score: 119
  • Evalue 1.50e-24
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 70.0
  • Bit_score: 118
  • Evalue 5.20e-25

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
ATGCGCCAACCAGACCGTATCGTCCGCATGAAAACCGTCCTCGCCCGGACGGGTCTTTCCAAGTCCACCATCTATCGCAAGATCGCCGAAGGCACGTTCCCGCCCCAATTGAAGATCAGCACCAACGGCGCGGGATGGAGGGAATCCGACATCAACCGCTGGGTCGCCAACCCTGCCGGATGGAGGACGCGTTCGCGCAACGAGTTCGATTTCCTCGATGACTATTGA
PROTEIN sequence
Length: 76
MRQPDRIVRMKTVLARTGLSKSTIYRKIAEGTFPPQLKISTNGAGWRESDINRWVANPAGWRTRSRNEFDFLDDY*