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SCN18_26_2_15_R1_B_scaffold_983_1

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3..2069)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 690.0
  • Bit_score: 1110
  • Evalue 0.0
Transcription-repair coupling factor n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FID2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 690.0
  • Bit_score: 1106
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 690.0
  • Bit_score: 1094
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2067
ATGACCCTGATCAAACCGATCGGTCTGCCGAAGGGCAGGAGCGGCCTTTACACGGTGGACGGCGTCGCCGACGGCTACGAGGCCTTCGCGCTCGCGCGGCTGGTCGAGGAAATCGGCGGCGACCGCCCGCTGCTTTTCGTCGCGCGCGACGGCCAGAAGCTGCCGGCGCTGATCGATGCGCTGGCCTTCGTGGCACCTGACCTTCCCGTTCTGGATTTTCCGGCCTGGGACTGCCTGCCCTACGACCGCGTGTCGCCCGGCGCGGATGCCGCCGCGCGCCGGCTCGCGGCCATGGGCGCGATGATCGCGCTGGCCAAGGCCCCGCATCGCGCGCTGGTGCTCACCACCGCCAATGCCGTGCTCCAGCGCGTGCCTCCGGCGCAGACGATCGACGCGCAGACTTTTCGTGCAAAGCCCGGCAATCAGGTGGATATGAACGCGCTGGTCTCGCGGCTGGAGACGGCAGGCTTCGAGCGCGTCTCGACCGTGCGCGACATCGGCGAATTCGCCGTGCGGGGCGGCATCCTCGACCTGTTCGCACCGGGCGGTGCGGAGGCGCTGCGTCTCGATTTCTTCGGCGACACGCTGGAATCGATCCGCGCTTTCGACATTGCCACGCAGCGCACCACCGGGCAGCGCGGCGAGATGGCGCTGCAAGCGATGAGCGAGGTGGCGCTGACGCCGGACACGATCAGCCGCTTCCGGCGCGCCTATATCGAGGCGTTCGGCGCCCCGTCGCCGGAGGACGCGCTCTATGCGGCGATCTCCGAGGGCCGCCGCTTCGCCGGCATGGAGCACTGGCTGCCCTTCTTCTACGAGCGGCTGGACACCGTGTTCGACTACCTTCCCGAGGCGCCGGTCGTTTTCGACCATCTGGCCCATCAGGCCATGGCGGAGCGCCACGCGCTGATCCTCGACCACTACGAGGCACGTGTCCGGCAGGCCTCCGGCGGGCTGAAGGACGCCGTGCCCTACAGGCCCGTCGCGCCCGACCGCCTCTATCTCTCCGCCGACGACGTGACCCGGCTGGTCGAGACGCGGACGGGGATCGATCTTACCCCCTTCGAGGCGCCGGAAGCGGACGGCCGGAAAATCCTGCATGCCGGCGCGCGCTCCGGCCGCGGCTTCGAGCAGGAGCGTGCCGATCCGAAGGCCAATGTCTTCGATGCCGTGGTGGCGCATATCGGCGCCGAGCGCGCCGCGGGTCGAAAGGTCCTTGTCGCGGGTTGGACCGAAGGCTCGCTGGACCGGCTCGGCCAGATTCTCGCCGAGCACCATCTCGGCAATCTCGCAAAGGTCGCGAGCCTTGCCGAGGCGGGGCGGATGAAGGACGGGCAGGCCGGCCTTGCCGTGCTGCCGCTGGAGACCGGCTTCGAGACGGATCAACTGGTGGTCGTGGCCGAGCAGGACGTGCTGGGCGACCGCCTCGTTCGCCGCAGGAAGCGCAAGCGGGCGGCCGATTTCATTGCCGAGGTAGCGTCGCTTTCGGCCAACGACATCGTCGTCCATGCCGATCACGGCATCGGCCGCTTCATCGGCCTGAAGACGATCCAGGCGGCCGGCGCCCCGCATGACTGCCTGGAGATCCACTATGCCGGAGACGGGCGCCTCTTCCTGCCGGTCGAGAACATCGAGCTCCTGTCGCGCTACGGCTCCGATTCGGCCGAGGCGGTGCTGGACCGGCTCGGCGGCGGCGCCTGGCAGTCGCGCAAGGCCAAGCTGAAGCGGCGCCTTCTGGAGATGGCCGGCCAGCTCATCCGGCTGGCGGCGGAGCGGCAGATGCGTCCCGCGCCCGCGATGAACCCGCCGGACGGGCTTTACGGCGAATTCTCCGCGCGCTTTCCCTATGAGGAGACCGACGACCAGCAGAGCGCCATCGACGCGGTGCTGGACGATCTGTCGCTCGGCAAGCCGATGGACCGGCTGGTCTGCGGCGACGTCGGCTTCGGCAAGACGGAAGTGGCGCTGCGCGCCGCCTTCGTGGCGGCCATGGAGGGGTTCCAGGTCGCCGTCGTGGTGCCGACCACGCTCCTGTCCCGCCAGCATTTCAAGACGTTCTCGCAGCGT
PROTEIN sequence
Length: 689
MTLIKPIGLPKGRSGLYTVDGVADGYEAFALARLVEEIGGDRPLLFVARDGQKLPALIDALAFVAPDLPVLDFPAWDCLPYDRVSPGADAAARRLAAMGAMIALAKAPHRALVLTTANAVLQRVPPAQTIDAQTFRAKPGNQVDMNALVSRLETAGFERVSTVRDIGEFAVRGGILDLFAPGGAEALRLDFFGDTLESIRAFDIATQRTTGQRGEMALQAMSEVALTPDTISRFRRAYIEAFGAPSPEDALYAAISEGRRFAGMEHWLPFFYERLDTVFDYLPEAPVVFDHLAHQAMAERHALILDHYEARVRQASGGLKDAVPYRPVAPDRLYLSADDVTRLVETRTGIDLTPFEAPEADGRKILHAGARSGRGFEQERADPKANVFDAVVAHIGAERAAGRKVLVAGWTEGSLDRLGQILAEHHLGNLAKVASLAEAGRMKDGQAGLAVLPLETGFETDQLVVVAEQDVLGDRLVRRRKRKRAADFIAEVASLSANDIVVHADHGIGRFIGLKTIQAAGAPHDCLEIHYAGDGRLFLPVENIELLSRYGSDSAEAVLDRLGGGAWQSRKAKLKRRLLEMAGQLIRLAAERQMRPAPAMNPPDGLYGEFSARFPYEETDDQQSAIDAVLDDLSLGKPMDRLVCGDVGFGKTEVALRAAFVAAMEGFQVAVVVPTTLLSRQHFKTFSQR