ggKbase home page

SCN18_26_2_15_R1_B_scaffold_890_11

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(12875..13291)

Top 3 Functional Annotations

Value Algorithm Source
Molecular chaperone DnaK n=5 Tax=Mesorhizobium RepID=V7F2Z3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 138.0
  • Bit_score: 256
  • Evalue 7.90e-66
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 138.0
  • Bit_score: 256
  • Evalue 1.10e-65
RNA polymerase-binding protein DksA similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 138.0
  • Bit_score: 253
  • Evalue 3.20e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAACGTGCTCGTGGATGCCAATTACGTACCGTCGGAGGAAGAGCCGTTCATGAACGAGCGGCAGAAATCCTACTTCAGGGCAAAGCTCACGGCCTGGAAGACCGACATTCTGCGCGAGGCGCGCGAGACGCTCGAAATCCTCCAGCAGGAAAACGCCAACCATCCGGATCTGGCCGACCGCGCGTCGTCGGAGACGGACCGCGCCATCGAACTGCGGGCCCGCGATCGCCAGCGCAAGCTGATCTCGAAGATCGACGCGGCGTTGCAGCGCATCGACGACGGCACCTATGGCTATTGCGAGGAGACCGGGGAACCGATCTCGCTGAAGCGCCTGGATGCGCGTCCCATCGCGACGCTGTCGATCGAGGCGCAGGAGCGCCACGAGCGGCGCGAGAAGGTTTATCGCGAGGACTGA
PROTEIN sequence
Length: 139
MNVLVDANYVPSEEEPFMNERQKSYFRAKLTAWKTDILREARETLEILQQENANHPDLADRASSETDRAIELRARDRQRKLISKIDAALQRIDDGTYGYCEETGEPISLKRLDARPIATLSIEAQERHERREKVYRED*