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SCN18_26_2_15_R1_B_scaffold_1118_24

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(22683..22892)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Martelella mediterranea RepID=UPI000377B7D9 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 69.0
  • Bit_score: 111
  • Evalue 2.70e-22
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:KFB08159.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 69.0
  • Bit_score: 111
  • Evalue 2.90e-22
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 110
  • Evalue 1.70e-22

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGACCCTCGGCACTGTAAAGTTTTTCAACACCACCAAAGGCTTCGGCTTCATCCAGCCGGACGGCGGCGAGCAGGATGTTTTTGTTCACATCTCTGCCGTCGAACGCTCTGGAATGACTACGCTGCGCGAAGGTCAGAAAGTCAATTTCGAGGTCGAGATGGACCGCCGCAACGGCAAGAGCGCTGCCGTCAATCTGTCCGAGGCGTGA
PROTEIN sequence
Length: 70
MTLGTVKFFNTTKGFGFIQPDGGEQDVFVHISAVERSGMTTLREGQKVNFEVEMDRRNGKSAAVNLSEA*