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SCN18_26_2_15_R1_B_scaffold_1094_23

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20884..21114)

Top 3 Functional Annotations

Value Algorithm Source
Phage transcriptional regulator, AlpA n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LJ0_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 75.0
  • Bit_score: 141
  • Evalue 3.50e-31
phage transcriptional regulator, AlpA similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 75.0
  • Bit_score: 141
  • Evalue 9.90e-32
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABJ07194.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 75.0
  • Bit_score: 141
  • Evalue 4.90e-31

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGCGTGAACCAGACCGTATCGTCCGCCTGAAAACCGTTCTCGCCCGCACCGGCCTGTCCCGGTCCACCATCTACCGCAAGATCGCGGAAGGCACGTTCCCGCCCCAGCTCAGGATCAGCACCAACGGCGCGGGATGGCATGAATCCGACATCGACCGCTGGATCGCCGATCCCGCCGGCTGGCGGCCACCAATAACAACGACTGACAGAATGGACGCGGGCCGCATGTAG
PROTEIN sequence
Length: 77
MREPDRIVRLKTVLARTGLSRSTIYRKIAEGTFPPQLRISTNGAGWHESDIDRWIADPAGWRPPITTTDRMDAGRM*