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SCN18_26_2_15_R1_B_scaffold_1094_29

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27012..27278

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE0D5D related cluster n=1 Tax=unknown RepID=UPI0003CE0D5D similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 79.0
  • Bit_score: 91
  • Evalue 3.70e-16
LysR family transcriptional regulator {ECO:0000313|EMBL:KGJ03440.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 83.0
  • Bit_score: 92
  • Evalue 3.00e-16
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 80.0
  • Bit_score: 89
  • Evalue 4.00e-16

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGCCTCAACTGCTAGGCTCGCGCATTCCCCTGGCGTCGCTGATCCAGACGCTTGCTGTCGTCGATTATTTGAGCTTCGACCGTGCCGCGCGGGCGCGCGGCGTAAGCCAGTCAAACGTCAGTGCAAGGATCAAGGCGCTGGAGGAAGACTTTGGAATCCTCCTGTTCGGGCGCAACGCGCGCGGCGAGACGTTCCTTGTCCGTCACGGCGGCGGCATTCGGCATCTATGGTCGATCGCTAATAGATGGGAGGGCGCGTCATGTTAA
PROTEIN sequence
Length: 89
MPQLLGSRIPLASLIQTLAVVDYLSFDRAARARGVSQSNVSARIKALEEDFGILLFGRNARGETFLVRHGGGIRHLWSIANRWEGASC*