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SCN18_26_2_15_R1_B_scaffold_1320_10

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7743..8567

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ABG1_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 274.0
  • Bit_score: 485
  • Evalue 3.60e-134
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EMS95628.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 274.0
  • Bit_score: 485
  • Evalue 5.00e-134
transmembrane component of ABC transporter similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 294.0
  • Bit_score: 239
  • Evalue 9.60e-61

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
GTGCTCGGCCTCCTGGTCGCCTACACCTTCTACAATGTCGGGCCGATCGTCTGGTTGGTCCTGTCGTCGCTGAAGAGTCGCATGGACCTCTTCACCATGCCTCCGAAGATCTTCTTCACGCCGGACCTGACCGGCTATCAGAGCGTCTTCGGCGTCGGCGTGGCGAAGGACAGCGCGGCGGCGATCGGCGTGTTCGATTCGCTGATCAACAGCATTGTGGTGTCGGTCAGCGGCACCGCGCTCGCCGTCTTTTTCGGGACGCTCGCCGGCTATGTGTGCTCGCGCTTCAACTTCATCGGCAAGGGCGACTTCATGTTCTTCGTGCTGTCGACCCGCATGCTGCCGCCTGTCGCCGTGCTGGTGTTCTACCATCTCATGTTCGCGCGGCTCGGGCTCGCCGACACGCGCTTCGGGCTGGTCCTCGTCTCCATCTTCGCCAATGTCGGCCTCGCCACCTGGATCATGAAGGGCTTCTTCGACGGCGTGCCGAAGGAGGTCGAGCAGATCGCCGTGGTCAACGGCTATACGCGCATGTACGCCTTCCTGCGGCTGGTGCTGCCCATGGTGAAGGGCGGCATCGCGGCGACGGCGGGCTTCTGCTTCATCTTCGCCTGGAACGAATTCGCCTTCTCGTCGATCCTGACCACCACGCAGGCCAAGACGCTGCCGGTGAAGATCTCGGCCGCGGCCGGCTCGACCGGTATCGAATGGACGCAGATCTGCGCGGCCGGCGTGGTGCTGATCGTGCCGGTGCTGATCTTCTTCTATCTCATCCGCCGGCATCTCCTGATGGGCATGACCTTCGGCGTGCTGGGCAGGAGGTGA
PROTEIN sequence
Length: 275
VLGLLVAYTFYNVGPIVWLVLSSLKSRMDLFTMPPKIFFTPDLTGYQSVFGVGVAKDSAAAIGVFDSLINSIVVSVSGTALAVFFGTLAGYVCSRFNFIGKGDFMFFVLSTRMLPPVAVLVFYHLMFARLGLADTRFGLVLVSIFANVGLATWIMKGFFDGVPKEVEQIAVVNGYTRMYAFLRLVLPMVKGGIAATAGFCFIFAWNEFAFSSILTTTQAKTLPVKISAAAGSTGIEWTQICAAGVVLIVPVLIFFYLIRRHLLMGMTFGVLGRR*