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SCN18_26_2_15_R1_B_scaffold_1543_4

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3272..3517)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 81.0
  • Bit_score: 105
  • Evalue 1.90e-20
Ribonuclease VapC n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LSI5_METRJ similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 81.0
  • Bit_score: 105
  • Evalue 1.30e-20
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 81.0
  • Bit_score: 105
  • Evalue 3.80e-21

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCGGTGACTGCCTCGCGCGTTCAAGTTCACGACTACCCGAAGCTTGCCGCAATCGAGATTCTTCCGATTACTGCTGAAATCGGCGATCTTGCTCTCGACGCCTTCGATCGGTACGGCAAAGGCCGTCATCCCGCTCGCCTCAACATGGGCGACTGCTTCGCCTATGCTTGCGCCCGGCATTACCGGCAGCCGCTGCTCTACAAGGGCGACGATTTCGCGCTAACCGATATCGAGACGGCGTAG
PROTEIN sequence
Length: 82
MAVTASRVQVHDYPKLAAIEILPITAEIGDLALDAFDRYGKGRHPARLNMGDCFAYACARHYRQPLLYKGDDFALTDIETA*