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SCN18_26_2_15_R1_B_scaffold_1543_23

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 18366..18776

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 133.0
  • Bit_score: 115
  • Evalue 5.20e-23
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002D42F48 similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 133.0
  • Bit_score: 121
  • Evalue 5.10e-25
Toxin of toxin-antitoxin (TA) system, containing PIN domain for nucleic acid binding protein similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 133.0
  • Bit_score: 115
  • Evalue 1.00e-23

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGACGCTTGTCATCGACAGTTCCATCGCCGCGAGTTGGGGGCTGCCCGACGAAAACTCGCCGGCGGCGCTACGGGCCTTGTCCATGGCCGAGGCAGAGGAGATTCTCGTTCCAGCACTTTTCCGGCATGAAGTCAGGAACGTCTTTCTCATCAATGAGCGACGCCGGCGCCTTACCGAAACGCAGACCGAAGCGGGACTGGGTCTCATCGCCGCCATGCCTATGAAGGAGGACGGGGACGGATCGGATGCCGCCGTGCTCGCCTATGCCAGACGTCATTCGCTGACCGCTTACGATGCATCCTATCTCGAACTTGCGATTCGTTCCGGTTCGAGTCTCGCCACGCTCGACAGGAAGCTGGCGGGCGCAGGAGTTTCCGAAGGGTTGACCGTCATCGCCGACTCCGGCTGA
PROTEIN sequence
Length: 137
MTLVIDSSIAASWGLPDENSPAALRALSMAEAEEILVPALFRHEVRNVFLINERRRRLTETQTEAGLGLIAAMPMKEDGDGSDAAVLAYARRHSLTAYDASYLELAIRSGSSLATLDRKLAGAGVSEGLTVIADSG*