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SCN18_26_2_15_R1_B_scaffold_1170_2

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(545..1537)

Top 3 Functional Annotations

Value Algorithm Source
Ribose ABC transport system, permease protein RbsC n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2YPP9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 314.0
  • Bit_score: 454
  • Evalue 8.10e-125
Ribose ABC transport system, permease protein RbsC {ECO:0000313|EMBL:GAD57356.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 314.0
  • Bit_score: 454
  • Evalue 1.10e-124
sugar ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 308.0
  • Bit_score: 323
  • Evalue 3.60e-86

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGAGTTCGCTCTCCTCGAGCGGCCGCGCCGCGCGGTTCCCGCTGCAGGCGTTTCTTTCCGGGCTGACCAGCGGCGCCGGAGTGATCGTCGTGATCTACCTGGCGCTCTATGCGCTTTACGGCTACCAGCAGCCTCGCGCGCTCTCGCTCCCGGCGATCGCGGCGCTGATGAACAACACCGCCCCGCTGGCATTGGCGGCGGCCGGACAGGCGCTTGTCGTCATAAGCCGCGGGTTCGACCTTTCGGTGGCCGGGGTCGTTTCGATCTGCAATGTCGTGCTCGCGGTATATCCGATCGGTGGCCCGGGCGGCGGGCTGATCTCGGTGCTGATCTGCATGGCGATCGGGGCGTCGGTGGGCGCCGTCAATGGCTGGCTGGTGGCCGTCCTGCGCATACAGTCGATCGCTGCGACGCTGTCGACCATGATCATCTGCCAGGGCATCGCGCTGGTGATCCTCAAGGCGCCGGGCGGTGCCGTTTCGAACTGGATCGCCGACGAAATGACCGACAGGCTGTGGAAGACGATCCCGGTCTCGGGCTTGGTGATCGCGGTCGTCATTGCCGTCTGGCTGGCCATCCGCCGGACGGATTTCGGGCTTTCGATCTATGCCATCGGCGCCGACGAGCAGGCTGCCAGCCTTTCGGGGGTGAATTCCAGGCGTGTCCGCTTCCTGACCTTCGTTCTGGCCGGCATCGTCTATGGGCTTTCCGGTTTCATGCTGAGCGCGCAGACGGCGACCGGCAATCCAACCTCCGGCACGCCCTTGCTCATGTTGTCCTTCGCCGCCGTGGCGCTCGGCGGCACTTCGCTGGCCGGAGGCAAGGGAGGCGTGTTTGCTTCGGTGATGGGAGCCGCGGTGCTGATGCTTCTCCAGAAGGTGTTGTTCTCGAGCGGCGTGTCGTCCTTCTACACGGGCATGTTCCAGGGAATCGCCCTCATCCTCGCCGTGGTCTTCAGCGGTCTCCTCGCGCATTTCGGGAAGCGGAGGTGA
PROTEIN sequence
Length: 331
MSSLSSSGRAARFPLQAFLSGLTSGAGVIVVIYLALYALYGYQQPRALSLPAIAALMNNTAPLALAAAGQALVVISRGFDLSVAGVVSICNVVLAVYPIGGPGGGLISVLICMAIGASVGAVNGWLVAVLRIQSIAATLSTMIICQGIALVILKAPGGAVSNWIADEMTDRLWKTIPVSGLVIAVVIAVWLAIRRTDFGLSIYAIGADEQAASLSGVNSRRVRFLTFVLAGIVYGLSGFMLSAQTATGNPTSGTPLLMLSFAAVALGGTSLAGGKGGVFASVMGAAVLMLLQKVLFSSGVSSFYTGMFQGIALILAVVFSGLLAHFGKRR*