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SCN18_26_2_15_R1_B_scaffold_2711_14

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13345..14421)

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626775 similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 330.0
  • Bit_score: 317
  • Evalue 1.30e-83
Periplasmic spermidine/putrescine-binding protein or ABC transporter {ECO:0000313|EMBL:CEP36783.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 339.0
  • Bit_score: 319
  • Evalue 4.70e-84
family 1 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 343.0
  • Bit_score: 295
  • Evalue 1.10e-77

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGTATCCTTGACCCGGAGACGGTTCGGCCAATTCGGCCTTGCCGCCGCTGCGACGCTTGCCGCACCGGCCTATATCCGTCGCTCCATCGCTGCGGGCGATGTGCGCATGCTGACATGGAAAGGCATGGGCAGCGATTTCCCCGATGCGGTCGAGAAATTCCGCGCCGAGACGGGCATCGGCGTGGTGCATGACTATTTTACTTCCGAGCTCGAAATGCTGACGAAGCTCCGCACCAATCCGGGCGCCTATGACGTGGCGCTGGTGAACTTCGTCTTTGTCGACCAGGCTGCCAAGCAAAAACTCATCGAGCCGCTGGACGTTTCAAAGCTGACGCAGTTCCAATATCTGCAGCCGAAGCTTCGAGACAGCAAATATACCAAGAATGGCGATACCTACTGGGGTGTGGCCTGGACGTGGGGCTCGACCGGCATCATCTCGAACACCACCAAGATCAAGCCGACTCCCGATTCGATCCAGGCGCTGTGGGATCCGGCGCATGCGGGCCGCGTCACATTCCGCGACGATCCGGTCGAGGCCGTATCCTGGGCCGCCATCGCGACCGGCCAGGACATGAATTTCCCGGCCGACCTGAAACTCGTCAAGGAGAAGCTCCTTGCCCTGAAGCCGCAGATCCAGACCTTCTGGAAATCGTCAGGCGAATGCGAGCAGATGTTTGCGGCTGAAACCGTCGATATCAGCCCCATGTGGAGCGGTTCGGCGGGGCGCATGCGCAAGCGCGACATCCCGGTCGATTACTTCGCGCCGAAGGAAGGCGGCATCGGCTGGTTCGATACGCTTGCCGTCGCGGCCGGTACGTCCAACCAGGAGGGCGCGCTGAAATTCATCGACTATCTGCAGTCGCCGGAGTTCTTCATCGGTTGGGACGAACGCGGCGGCGCGCCGGCTCCGGCAAATCTCGAGACCCAGAAGCAGTTGCCGGATGATTCCTTCAACAAGACCGTCCTCGGTGATCCCAAGCATTTCGAAAGCCTGATTTTCATGGAAGATCTCGGTGACGAGAAACGCCAGGAATATCTCGATCTCTGGGAAGACGTGAAGGCTACATTCGGCTGA
PROTEIN sequence
Length: 359
MVSLTRRRFGQFGLAAAATLAAPAYIRRSIAAGDVRMLTWKGMGSDFPDAVEKFRAETGIGVVHDYFTSELEMLTKLRTNPGAYDVALVNFVFVDQAAKQKLIEPLDVSKLTQFQYLQPKLRDSKYTKNGDTYWGVAWTWGSTGIISNTTKIKPTPDSIQALWDPAHAGRVTFRDDPVEAVSWAAIATGQDMNFPADLKLVKEKLLALKPQIQTFWKSSGECEQMFAAETVDISPMWSGSAGRMRKRDIPVDYFAPKEGGIGWFDTLAVAAGTSNQEGALKFIDYLQSPEFFIGWDERGGAPAPANLETQKQLPDDSFNKTVLGDPKHFESLIFMEDLGDEKRQEYLDLWEDVKATFG*