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SCN18_26_2_15_R1_B_scaffold_2465_6

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4831..5712

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0DDV1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 290.0
  • Bit_score: 397
  • Evalue 1.00e-107
DNA-binding protein {ECO:0000313|EMBL:KJS11033.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 292.0
  • Bit_score: 462
  • Evalue 2.80e-127
Transcriptional regulator, XRE family similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 283.0
  • Bit_score: 282
  • Evalue 1.10e-73

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGGTAAGATACGATGAAATCGGTCAGCGCTTGAGGGCGTTCCGGCTTGGTTCGGGCATGAGCGCGGACGAAATCGCCAAGCGCATCGGAATTTCGAGGACCGCCGTCTACCGCTTTGAAAAGGGCGAGGTGGTCAAGATCGAGACCCTGGCCAGCCTGGCCGAACTTCTCGGCGTCTCCCTGGCCACTCTTCTCGGCATCGAGATCGAATATATCTCGTCGGCTGTTACTTATTTCGAACGGCTGCGACAGCTCGAAGAAGCCGCGGATCGGATCATCGTCCTCGCCGGTCCGATCTCTTTCCTCGTCGGCTCGCCGGAGTTTCGCAACCAGCTGTCGGATTTGCTCCGGGAAAGCGTGGAGAGCGAAGACGGCCGCAGGGAGAAATCGCTGCAGGATGTGGAGCGAATACTCGAAATACTGGATGAAAGGCGGAAGAATTACGAACGGCGCAAGCCTGCCATCGTGAACCTGATGGCGGCGCTCGACATCGAGCGACTGCTCAGATCGGGCTTCGTCGGCCGGCCGCTGATCGCGGAGGAGGAAGTCCGCGTCCGCCAGCAGCATGCGCGTGCCGAGATAGAGCATTTCGCCCACCTCATGGAGGCCGAACCCATCGGGATACAGATCGGCCTCGTTACCGGGACGCTGCCCCATACGGGCTTCCAGATCTTCCGCAGCGGTGACCGCAAGACGCTATCGATAAGCCCGTTCCGGCTCGGCGAGCAGCCCAATATCAGGCTGGGCGTCGCCATGATCACGGAGAACCACGAAGCCGTGTCGCTGCACGAGGCCGTTGTGGACGAGATGTGGCGCACCGCGCTCAAAGGCCGCGAAGCCGCCGCCTATCTGCGCAGCATGATCGCGTCGATCTACGGCTAA
PROTEIN sequence
Length: 294
VVRYDEIGQRLRAFRLGSGMSADEIAKRIGISRTAVYRFEKGEVVKIETLASLAELLGVSLATLLGIEIEYISSAVTYFERLRQLEEAADRIIVLAGPISFLVGSPEFRNQLSDLLRESVESEDGRREKSLQDVERILEILDERRKNYERRKPAIVNLMAALDIERLLRSGFVGRPLIAEEEVRVRQQHARAEIEHFAHLMEAEPIGIQIGLVTGTLPHTGFQIFRSGDRKTLSISPFRLGEQPNIRLGVAMITENHEAVSLHEAVVDEMWRTALKGREAAAYLRSMIASIYG*