ggKbase home page

SCN18_26_2_15_R1_B_scaffold_2335_2

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1006..1410

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE4DF9 related cluster n=1 Tax=unknown RepID=UPI0003CE4DF9 similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 133.0
  • Bit_score: 144
  • Evalue 7.30e-32
Polysaccharide biosynthesis protein GtrA {ECO:0000313|EMBL:ESZ00815.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 133.0
  • Bit_score: 144
  • Evalue 1.00e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 124.0
  • Bit_score: 139
  • Evalue 6.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGCGGGCGCTGCTCGAGTCCCGGCTCGTGCGCTTCCTGGCCGTGGGCGCAGGCGCGGCCGGCCTGCTCTTCGCCTTGTCCTATGCGCTGGTCTCCGTCGGGTTGCGGCCCTTCGCCGCCAGCGTCATTGCCTACGCCGTGGCGTTTGCCGTCGCTTATACCGCGCAGCGCAACTGGACCTTCGGCGCGACCCAGACGCATGGCGTCGCCCTGCCGCGCTATTTCGCCGTCCAGCTCGGCTGCGCGCTGCTCGCCGGCGCGACCTCGCATGTCTGCGTGGAATGGCTCGGAGCCTCCCATATCGTGATGTCGGCCGTGACGACCGTGCTCGCCAGCGCCGTCAGCTACGTGCTCTCGTCGCGATGGGTGTTCGCATGCTCCGGCGAGCCGCCGCTGGGCGCCTGA
PROTEIN sequence
Length: 135
VRALLESRLVRFLAVGAGAAGLLFALSYALVSVGLRPFAASVIAYAVAFAVAYTAQRNWTFGATQTHGVALPRYFAVQLGCALLAGATSHVCVEWLGASHIVMSAVTTVLASAVSYVLSSRWVFACSGEPPLGA*