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SCN18_26_2_15_R1_B_scaffold_2335_3

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1472..3298

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDE2EC related cluster n=1 Tax=unknown RepID=UPI0003CDE2EC similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 590.0
  • Bit_score: 520
  • Evalue 1.70e-144
Polysaccharide biosynthesis protein GtrA {ECO:0000313|EMBL:ESW77537.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 590.0
  • Bit_score: 520
  • Evalue 2.40e-144
putative membrane protein, required for N-linked glycosylation similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 607.0
  • Bit_score: 508
  • Evalue 2.50e-141

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Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1827
ATGGCCATCTCCGCAATCGCCGAAGAACGAAAGCCCCTCGGGCGCGCGCCCGTCTGGGCGCGGGATCTCGGCCTGTCGTTCCTGATCGCGGCCTGCGTCTTCGCCTCCTACGCCGCTGCCGGCTTCCCGACGCTCGCCAATCCTGAGGGCGACAATGACAGCATGCTGCGCCTCGTCGAGGTCCGCGACCTGCTGGCCGGGCAGGGCTGGTACGACCTTCACCAGTACCGCATGGGGCCGCCGGGCGGCTTCGTCATGCACTGGTCGCGCTTCATCGATGCGCCGATCGCGCTGCTCGTCTTGATCGCCTCCGCCTTCGGCGCCGGCCCGGCGCTGGCGGAAGAGATCGCGCTGACCGCGTGGCCGTTCATCCTGATGGGCCTGACGCTCTTCGCCCTCGTTCGCCTCGCGCGAACCCTCGGCCGGGAGAGCGTCGTCTTCCCGGCGGTCGTTCTGGGAACCGGCGCCCTCTACTTCCTCGGCATCTTCAGGCCCGGATCGATCGACCATCACAATGCGCAGCTGGCGCTGACGGTCGGCATGCTGGTCTGCCTCATTCGGGCACCCGCGGCGCGCATCTATTCCGTTTCGGCCGGGCTCTGCGCCGCGGTCATGCTGGCGATCGGCATGGAGACCGCGCCCTATGTGGCGATCGCCGGCGGGGCCGTCTCCGTCGCCTTCCTCTGGAGAGGGGAGGAAGAGGCCCTGCGCGCCACCGATTTCGGCTTGAGCTTCGCCGCCTGGTCGGCGGCGGCGTTCTTCGCGACCGTCGGTCCGTCGGCCTGGCTGACGCCGGCCTGCGACGCCATGTCGAACGTCCAGCTCTCGCTTGCCGTGGTCGGCGGGCTGGGGCTGGCCCTGGCGGCGCGCCTTCGCGCGACGAGCACCAGCGTTCCGCGGCGGCTGGCGGGGCTGCTCGCCGTCGGCGTCGCCGTCGCCGCGACGATGCGCCTCGCTTTTCCGCAGTGCCTCGGCGACCCCTATGCCGGGGTCGACCCGCTGTTGCGCGAGCTCTGGCTGAACTATGTGCTCGAGGCGCAATCGATCGTCGCCTTCGCCAAGTCGGACTGGACCAGCATCCTGGCCTACCACGCCACGCCGATGCTGGCGCTCGCCGTGCTGGCGGTGCGCATATGGCGCGGCGACACCGGCCGCCCGATCCTCTTCCTCGGCGGATTCCTGCTTGCCGCTTTCCTCGTGAGTTGCTGGCAGGTGCGCGGCGCATCCTTCGCCATCCCGCTCGCCACCACGTCGCTCGCGCTCGGTGTCTCCATGCTCCGGGAAAAGGCCGCCGATCGCGCCACGGCAGGGAACTCGATCGCTCTCGTCCTGGGCTGGCTGCTGTCGGTCAACATCGTATGGGCGACCATCGGCCATCAGATCCGCATCAACGTCCTTCCCCAGGACGTCGATGTTGCGGAAGGCGGGGACGACGCCTGTTCGGCCGCGGCGAGCTTTCCCCATCTGGCGCAACTGCCCGCGGGGACGGTGATGGCGGTGTCGGATCTCGGCTCGCCCGTGCTCGCCTATACCCCGCATCGCGCGTTCGCCGGCCACTATAACCGCAACATCGCCGGCAATCTGACGATGGTGAAGGCGATGCTCGCCGCTCCCGACGAGGCCGGTCGCATCCTGCGCGGCGCCGGAGCGGACTACCTCGTTCTTTGCGACGGCAATGCGGAGAACGCCAATCTCTCGACGCACGCGCCGTCGGGCCTGATGGCGGCCCTGCTGGCCGGGCGGATCCCGGCATGGCTGGAGGCCGATCCGGCGTCGCAGGGGCAGGTGCTGAAGATCTATAGGGTCCACGCCGCCGCGGCACCCTGA
PROTEIN sequence
Length: 609
MAISAIAEERKPLGRAPVWARDLGLSFLIAACVFASYAAAGFPTLANPEGDNDSMLRLVEVRDLLAGQGWYDLHQYRMGPPGGFVMHWSRFIDAPIALLVLIASAFGAGPALAEEIALTAWPFILMGLTLFALVRLARTLGRESVVFPAVVLGTGALYFLGIFRPGSIDHHNAQLALTVGMLVCLIRAPAARIYSVSAGLCAAVMLAIGMETAPYVAIAGGAVSVAFLWRGEEEALRATDFGLSFAAWSAAAFFATVGPSAWLTPACDAMSNVQLSLAVVGGLGLALAARLRATSTSVPRRLAGLLAVGVAVAATMRLAFPQCLGDPYAGVDPLLRELWLNYVLEAQSIVAFAKSDWTSILAYHATPMLALAVLAVRIWRGDTGRPILFLGGFLLAAFLVSCWQVRGASFAIPLATTSLALGVSMLREKAADRATAGNSIALVLGWLLSVNIVWATIGHQIRINVLPQDVDVAEGGDDACSAAASFPHLAQLPAGTVMAVSDLGSPVLAYTPHRAFAGHYNRNIAGNLTMVKAMLAAPDEAGRILRGAGADYLVLCDGNAENANLSTHAPSGLMAALLAGRIPAWLEADPASQGQVLKIYRVHAAAAP*