ggKbase home page

SCN18_26_2_15_R1_B_scaffold_4101_4

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2425..3795)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX15_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 461.0
  • Bit_score: 815
  • Evalue 1.90e-233
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EYR84300.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 461.0
  • Bit_score: 815
  • Evalue 2.70e-233
conjugal transfer protein TrbL similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 458.0
  • Bit_score: 795
  • Evalue 4.40e-228

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGGCAACACGGGCGTCATCGACAATTTCCTCGGCGTATTCACGTCCTACATCGACAGCGGGTTCGGCCTGCTCGGCGGCGAGGTCGCCTTCATCGCCACGACGCTCATTGTCATCGACGTGACGCTCGCCGCGCTCTTTTGGGCATGGGGCGCGGATGACGACATTATCGCGCGGCTGGTCAAGAAGACCCTGTTTGTGGGCGTCTTCGCTTACATCATCAGCAATTGGAACAACCTCGCCCGCATCGTCTTCGAGAGCTTCGCCGGCCTCGGCCTCATGGCGTCGGGAACCGGCTTTTCCGTCACCGATCTGATGCGGCCGGGCCGCGTCGCGCAGACCGGCCTCGACGCCGGCCGCCCGCTGCTCGATTCCATTTCCGACCTGATGGGCTGGATCGCCTTTTTCGAGAACTTCATCCAGATCGCGTGCCTGCTGTTCGCATGGGCGCTGGTGGTGCTGGCCTTCTTCATCCTCGCCATCCAGCTTTTCGTGACCCTGATCGAGTTCAAGCTGACCACGCTCGCCGGCTTCGTCCTCATCCCCTTCGGCCTGTTCGGCAAGACCGCCTTCATGGCCGAGAAGGTCTCGGGCAACGTGGTGTCGTCCGGCATCAAGGTCTTGGTGCTCGCCGTCATCATCGGCATCGGCAGCACCTTGTTTTCGCAATTCACGGCCGGTTTCGGCGGGGCAACCCCGACCATCGACGACGCTATGGCGATTGTGCTCGCCGCGCTGTCGCTGCTCGGCCTCGGCATCTTCGGCCCCGGCATCGCCAACGGCATCGTCTCGGGCGGCCCGCAGCTTGGCGCGGGCGCAGCCGTGGGCACCGGCCTCGCTGCCGGCGGCATGGTGCTTGCGGGCGGTGCGGCGGCTGGCGGTGGGGCCATGCTTGCCGCGAAAGGCGGCGCCGCTGCTCTGTCCGGCGGGGCCGCGGCCGTTCGCGGCGGGGCTGCCACCGCGGGCGCGGCAACCGCCGCCTATAGTGTCGGAGCGCTGGGCCAGAGCGGAGCGGCAGGCGTTGCCTCCGGTATGGGTGGTGTGGCGCGTGCCGCAGGATCGGCCGCCATCTCGCCCTTCAAACGCGCCGTCTCGCGTGCCAGCGAATCCGTCAAGTCCAGTTTCAGCGATGGCGCCCGTGCGGGCTTTGCTGCTGGCGGCGGCACATCGTCAATGGGCACGGTCGGCGGCGCGAGCGCCGCACCGGCCGCATCAGCCGCATCGGCGGGCAACCCTCCCGCCTGGGCGCAGCGCATGGGGCGCTCGCAGGCGATGAACCACGGCACGACCATGGCCGCTCATGCGGTGCGTTCCGGCGACGGCCATGGCGGCGGTTCCTCCGTCAACCTTTCCGAAAGTGACCGCTCATGA
PROTEIN sequence
Length: 457
MGNTGVIDNFLGVFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWAWGADDDIIARLVKKTLFVGVFAYIISNWNNLARIVFESFAGLGLMASGTGFSVTDLMRPGRVAQTGLDAGRPLLDSISDLMGWIAFFENFIQIACLLFAWALVVLAFFILAIQLFVTLIEFKLTTLAGFVLIPFGLFGKTAFMAEKVSGNVVSSGIKVLVLAVIIGIGSTLFSQFTAGFGGATPTIDDAMAIVLAALSLLGLGIFGPGIANGIVSGGPQLGAGAAVGTGLAAGGMVLAGGAAAGGGAMLAAKGGAAALSGGAAAVRGGAATAGAATAAYSVGALGQSGAAGVASGMGGVARAAGSAAISPFKRAVSRASESVKSSFSDGARAGFAAGGGTSSMGTVGGASAAPAASAASAGNPPAWAQRMGRSQAMNHGTTMAAHAVRSGDGHGGGSSVNLSESDRS*