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SCN18_26_2_15_R1_B_scaffold_4101_11

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6162..6542

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator helix turn helix domain n=10 Tax=Acetobacteraceae RepID=C7JFB5_ACEP3 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 126.0
  • Bit_score: 229
  • Evalue 1.20e-57
DNA-binding protein {ECO:0000313|EMBL:KIZ41938.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 126.0
  • Bit_score: 234
  • Evalue 5.40e-59
transcriptional regulator helix turn helix domain similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 126.0
  • Bit_score: 229
  • Evalue 3.50e-58

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCGACTGAACTGAAACCCATCCGCACCGAGGCGGATTACGATGCGGCGCTCGCCGAGGTGGAACGGCTTTGGGGCGCGAAGAGCGGCACCCCGGACGGCGACCGGCTCGACGTGCTGGCGACGCTGATCGAGGTCTATGAAGAGAAGCATCATCCCATGGACCCGCCGGACCCGATCGAGGCGATCCGGTTCCGCATGGAGCAGCAGGGACTGACCCGCAGGGACCTGGAGCCGATGATCGGCCCGCGCAATCGTGTCGCGGATGTGCTGAACCGCAAGCGGGGCCTGTCCATCGACATGATCCGGCAGCTGCACGACCATCTCGGCATCTCGGCCGAGGTGCTGATCCGACCGAGCCGCTTCGACAAGGTTGCCTGA
PROTEIN sequence
Length: 127
MATELKPIRTEADYDAALAEVERLWGAKSGTPDGDRLDVLATLIEVYEEKHHPMDPPDPIEAIRFRMEQQGLTRRDLEPMIGPRNRVADVLNRKRGLSIDMIRQLHDHLGISAEVLIRPSRFDKVA*