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SCN18_26_2_15_R1_B_scaffold_4113_3

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2871..3914

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter membrane spanning protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2Z1_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 346.0
  • Bit_score: 366
  • Evalue 2.30e-98
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJB97583.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 335.0
  • Bit_score: 381
  • Evalue 9.90e-103
ribose/xylose/arabinose/galactoside ABC-type transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 341.0
  • Bit_score: 367
  • Evalue 3.00e-99

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGACGGTGGATACGCAGATCGGCCAGCAGCAGGACCGCTACACGGTCGCCGACGCGCCGCCGCGCACGCTGCGCGACTGGCTGCTGCGCTGGGAGACGATCCTCGTCATCCTGCTGGTGCTGACGGTGGTGGTGAACACCATCGTCTCGCCCTACTTCCTCGACGTCTTCAATCTCGCCGACGCCACCTTCAATTTCTCCGAGAAGGCGATCATCGCGCTCGCCATGGCGCTGCTCATCCTGGTGCGCGAGATCGACCTGTCGGTCGCGGCCATCGTGGCGCTCGCCTCCATGTCGATCGGCTATGCCGCCGAGGCGGGCTACGGGCCGGCCTCGCTCTTCGCCGTCGGCATCGGCGTCGGCATCCTGTGCGGCGTCTTCAACGGCGCGGTGGTGACGTTCTTCCGGCTGCCGTCGATCGTCGTGACCATCGGCACCATGTCGCTCTTCCGCGGCATCACGCAGGTCATCCTCGGCGACCAGGCCAAGACCAAATATCCGCAGGGCTTCCTCGATCTCGGCCAGAGCTACTTCATCAAGATGAAGGAGACCGGCATCTCCTGGCTGTTCGTGCCGCCCGTGCCGCTCTCCTTCCTGATCTTCCTCGTGCTCGCCGTGCTGTTCGGCATCGTGCTGCACAAGACGGCTGTCGGCCGCCAGCTCTTCGCCATCGGCTCGAATCCGGTGGCGGCGCGCTTTTCCGGCGTGCCGGTGGACCGGCTGCGCTTCCTGCTCTTCGTGCTTGCCGGCCTGCTCTGCGGCCTGGCGGCGGCGCTGCTGACGGCCCGGCTCGGCTCCATGCGCTCCAACATCGCCATCGGCTGGGAGCTCGACATCGTGACCATGGTCATCCTCGGCGGCGTGTCGATCGCCGGCGGCGTGGGCTCCATCACCGGCGTCTTCCTGGCCGTGCTGGTGCTCGGCCTCGTCACCTTCGGCATGTCGCTCAACAACATTCCCGGCCAGGTCGTCAGCGTCTATATCGGCGCGCTGCTGATCGCGGTCATCGGCATCCCGCGCATCATCGAGAAGTTCAGGCGGTAG
PROTEIN sequence
Length: 348
MTVDTQIGQQQDRYTVADAPPRTLRDWLLRWETILVILLVLTVVVNTIVSPYFLDVFNLADATFNFSEKAIIALAMALLILVREIDLSVAAIVALASMSIGYAAEAGYGPASLFAVGIGVGILCGVFNGAVVTFFRLPSIVVTIGTMSLFRGITQVILGDQAKTKYPQGFLDLGQSYFIKMKETGISWLFVPPVPLSFLIFLVLAVLFGIVLHKTAVGRQLFAIGSNPVAARFSGVPVDRLRFLLFVLAGLLCGLAAALLTARLGSMRSNIAIGWELDIVTMVILGGVSIAGGVGSITGVFLAVLVLGLVTFGMSLNNIPGQVVSVYIGALLIAVIGIPRIIEKFRR*