ggKbase home page

SCN18_26_2_15_R1_B_scaffold_6808_3

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1413..2159)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFF6E5 related cluster n=1 Tax=unknown RepID=UPI0003CFF6E5 similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 249.0
  • Bit_score: 291
  • Evalue 6.80e-76
GntR family transcriptional regulator {ECO:0000313|EMBL:ESZ72075.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 249.0
  • Bit_score: 291
  • Evalue 9.60e-76
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 240.0
  • Bit_score: 277
  • Evalue 2.20e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGGAAGCGACAAGCGAAATCGAGGGTGGCGACGCGCCGGCCGCCCGTCGGCCGCGCGTGACGCCCCAAATCACCCGCGCCCTGGCCGGCGAGATCCTCTCGGGGCGCTATCCGCCGGGCACCGCGCTACCCACCGAGAATGAGCTTGGATCGGCGTATGGCGTGAGCCGGACCGTCATTCGCGAGGCGCTGAAGGTTCTCGCGGCCAAGGGTCTGATCCTCAGCCGCCCGCGGATCGGAACCATCGTTTGCGAGCCGGACAACTGGAGCCTGCTCGATCCGCAGGTCATGGAATGGCACGGGCCGACCCTGTTCGATCGCAACCTGCTCGAAGCCGTGCTCGAAACACGCCGCGCACTGGAGCCTCTCGCGGCGTCGCTCGCGGCACAGCGGGCCAGCCTGCGGGAAGTCGCCGACCTCGACGCCGCCTGGCAGCGCATGGCCGCCGGGGCCAAGGACGTCGACCGGTTTTCAGGCGCCGATATCGAATTCCACCGCGTCCTCTACCGTGCCAGCCACAATCCGGTCATCCGCCAGATCGGCGTCCTGATCGACGCAGCGCTCAGATATTCCTTCGAGACCTCCAACAAGACCGTATTCGACCGCACTCAAGCCCTGAAATGCCATCGCGCCGTCGTCGAGGCGCTTCGCCTGCGCGACAGTGCGGCGGCGGCTGCGGCAGCGGCGAGCCTGATCGAGCAGGCGGCGCACGACATCGATCTTGCCGGGCGCAAGAGCAAAACCTGA
PROTEIN sequence
Length: 249
MEATSEIEGGDAPAARRPRVTPQITRALAGEILSGRYPPGTALPTENELGSAYGVSRTVIREALKVLAAKGLILSRPRIGTIVCEPDNWSLLDPQVMEWHGPTLFDRNLLEAVLETRRALEPLAASLAAQRASLREVADLDAAWQRMAAGAKDVDRFSGADIEFHRVLYRASHNPVIRQIGVLIDAALRYSFETSNKTVFDRTQALKCHRAVVEALRLRDSAAAAAAAASLIEQAAHDIDLAGRKSKT*