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SCN18_26_2_15_R1_B_scaffold_9359_5

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2075..2671)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 198.0
  • Bit_score: 327
  • Evalue 1.30e-86
UPI0003CF8368 related cluster n=1 Tax=unknown RepID=UPI0003CF8368 similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 198.0
  • Bit_score: 327
  • Evalue 9.00e-87
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 198.0
  • Bit_score: 319
  • Evalue 4.10e-85

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCCGCGACTTTTCACCGCCCTCGAAATTCCGCGTGATGCCGCGCTTTCCCTGTCGCTGCTGCGCGGCGGCCTGCCTGGGGCCCGCTGGATCGACGTCGAGAACTACCATCTGACGCTGCGCTTCATCGGCGACGTCGAGGGCCATGTCGCCGACGAGATCGCCGATGCGCTCGACCGGGTGCGGCGGCCCTCCTTCCCGCTCACGCTCTCCGGCGTCGGCCAGTTCGGCGGCCGAAAGCCGCACTCGATCTGGGCGGGTGTCAAGGTATCGCCGGATCTGGCGGCGCTGCAGGCGGAGATCGAGCGCATCTGCCAGCGGCTGGGATTGCCGGCCGATCCGCGCAAGTTCACGCCGCATGTGACGCTGGCGCGGCTGAAGAACGCCAGCCCTGACGCGGTGGCGCGTTATCTCGCCATGCGCGGCAACTTCGCCGCCATGCCCTTCAAGGTCGGCCGTTTCGTGCTGATGTCGTCGAAGGAATCGGTCGGCGGCGGCCCCTACATCATCGAGGAGGCATGGCCGCTCGGCGCTGCCGACGGTCATGCGGCCGGCCCGGCCGCCGGCAAGGCGGACGCCCTCGGTTCCATGCGCTGA
PROTEIN sequence
Length: 199
MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHLTLRFIGDVEGHVADEIADALDRVRRPSFPLTLSGVGQFGGRKPHSIWAGVKVSPDLAALQAEIERICQRLGLPADPRKFTPHVTLARLKNASPDAVARYLAMRGNFAAMPFKVGRFVLMSSKESVGGGPYIIEEAWPLGAADGHAAGPAAGKADALGSMR*