ggKbase home page

SCN18_30_10_14_R2_B_scaffold_767_27

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 29636..31225

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54-dependent transcriptional activator n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZ15_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 528.0
  • Bit_score: 551
  • Evalue 7.80e-154
Sigma 54-dependent transcriptional activator {ECO:0000313|EMBL:EDL62310.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 528.0
  • Bit_score: 551
  • Evalue 1.10e-153
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 524.0
  • Bit_score: 378
  • Evalue 2.60e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1590
ATGCCCGCCCGTCGGGTTCTCGTGTCGTGGATCGGATACGCCGACTTCCGCGCGCTGGCGGCGACACTGCCGGCGGGTGACCAGGCCGAGGTGCTGCGCGGGCTCAACCCGCCGACGCCGCTCGCCGGGCAGGCCGGGCCGCTCAAGACGCTCCTCGACCGCGAGCGCTTCGACGCCGTCCACCTCTTCACCAGCCACACCGGGCCGCGCAACCGGCTCTACGCCCGCTGGGTCGGCGGGAACCCGACGCTGCACCACCTGAAGGTTCCCAACCCGACGGACTACGAGGACGTGTTCCGCCTCGTGGACGCCGAGTTGGCGAAGGTCGTCGCGCTGCCGCGCGCCGCGGACGTGGAGCTGTGCGTCCACCTCAGCCCCGGCACGCCGACGATGACGGCCGTGTGGGTGCTCCTCGGCAAGAGCAGGTACCAGCCCGCGACCTTCTACCAGACGCACGACGGCCGGGCGTGGGTCACGACGGTCCCGTTCGACCTCGTGGTCGATTACGTCCCGCAGGTGCTGCGCGACGCCGACGCGCGGCTCCAGCAGCTCGCCGCCGAGGGCCCGCAGGACGTGCGCGGGTTCGAGGACGTGGCCGGCGACAGCCGCGGCATCCGCGTCGCGGTCGGCCGGGCGCGGCGGGCCGCGGGGCGCGACGTGTCGGTGCTCGTCCTCGGCGAGAGCGGCACGGGCAAGGAGCTGTTCGCGCGGGCGGTCCACGACGCCAGCCCGCGCCGCGGCGGGCCGTTCGTGGCGGTCAACTGCGCGGCGTTCCCGACGGAGCTACTGGAGAGCGAGCTGTTCGGGCACCGGAAGGGCGCGTTCACCGGCGCCGACCGCGACCGCGCCGGCGCGTTCGCCGCGGCCGACGGCGGCACGCTGTTCCTCGACGAGGTGGGCGAGTGCGACCCCGGGATGCAGGCGAAGTTGCTGCGCGTGCTGGAGCCGCCCGCCGACGGCCCGTGCCGGCGCGTGTTCCGCCGCGTCGGCGACGCCCGCGCGCAGACCGCCGACGTGCGCGTCGTCGCGGCCACGAACCGCGACCTGCTCGCGGCGGTGGCGCGGAACCAGTTCCGCGAAGACCTGTACTACCGCCTCGCGGTCATCACCCTCAAGCTGCCGCCGCTGCGCGACCGCCGCGAGGACGTGCCGGCGGTCGCGCAGCGGCTCCTCGACCGCATCAACCGCGATTTCGCGCGGCAGGAGCCCGGGTTCCGCCCGAAGCGGCTGTCGGCGGCGGCGGTGGCGTTCGTGCGCGGGCAGCCGTGGCCCGGGAACGTCCGCCAACTCTACAACACGCTCGTTCAAGCGGCCGTGATGACCGACGGTGAGGTGATCGACCGCCGCGACGTGGCCGACGCCGTCGCCGAGGTGCCGGGCGCGGGCGTGGTCGATCAGCTCGGCCTGCCGCTCGGCGGCGGGTTCTCGCTGGAGCGGCACCTGGAGGGCATCCAGCGCCACTACCTCCGCCGCGCGCTCGACGAGGCGGGCGGGGTGCAACGGCGGGCGGCGGAGCTGCTCGGCTACCGCAACTACCAGACGCTCGCCGCACAGCTCGACCGCCTCGGCCTCCGCGCCGGGGCGCAATAA
PROTEIN sequence
Length: 530
MPARRVLVSWIGYADFRALAATLPAGDQAEVLRGLNPPTPLAGQAGPLKTLLDRERFDAVHLFTSHTGPRNRLYARWVGGNPTLHHLKVPNPTDYEDVFRLVDAELAKVVALPRAADVELCVHLSPGTPTMTAVWVLLGKSRYQPATFYQTHDGRAWVTTVPFDLVVDYVPQVLRDADARLQQLAAEGPQDVRGFEDVAGDSRGIRVAVGRARRAAGRDVSVLVLGESGTGKELFARAVHDASPRRGGPFVAVNCAAFPTELLESELFGHRKGAFTGADRDRAGAFAAADGGTLFLDEVGECDPGMQAKLLRVLEPPADGPCRRVFRRVGDARAQTADVRVVAATNRDLLAAVARNQFREDLYYRLAVITLKLPPLRDRREDVPAVAQRLLDRINRDFARQEPGFRPKRLSAAAVAFVRGQPWPGNVRQLYNTLVQAAVMTDGEVIDRRDVADAVAEVPGAGVVDQLGLPLGGGFSLERHLEGIQRHYLRRALDEAGGVQRRAAELLGYRNYQTLAAQLDRLGLRAGAQ*