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SCN18_30_10_14_R2_B_scaffold_662_28

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 28620..30200

Top 3 Functional Annotations

Value Algorithm Source
ABC efflux pump, inner membrane subunit n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C555B similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 529.0
  • Bit_score: 555
  • Evalue 5.40e-155
lipoprotein release ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 532.0
  • Bit_score: 245
  • Evalue 2.00e-62
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGA27658.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 532.0
  • Bit_score: 245
  • Evalue 9.80e-62

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Taxonomy

SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1581
ATGAACCTCATCCAAGCGATCCGCTTCGCCCTCGGCGGGCTCTGGCGGCAGAAGGTGCGGACGGCGCTGACCCTCGTCGGCGTCGCGGTCGGTACCGCGGCGCTCGTGTTCAGTCTGTCGCTCGGGATCGGGCTGCGGGCGTTCATCGACCGCGAGTTCCGCGAGCGCGACGCCTTCTGGCGCGTCACCGTCCGCGTCGCCGATCCCACCCCGGACCCCGAGAAGGTCCCGCCCGAGAAGGTCGAGGTGACCGGCGCGATCGACCCCGAGCGCCGCGCCCGCCTCCGCGAGGCGCTCGCCCGGCGGTACCTGCGCGACGAGCTCCGCACCCCGCCCAAGCCGCTCGACAAGGCCGCCGTCGCCGCGCTCGAGGCGCTCCCCGACGTGTCCGAGGTCCGCATCGTCCGCTCCTCGAACGGCCGCGCCTGGCTCGCCGACCGCTCGGCGCCCGCGTTCGTGGTGTCCGCCAAGCTCGACTCGCTGACACCGCGCCTCATCGCGGGCACGCTTCCGGTCGATGACTCCGGCGTCGTCCTGAGCGAACTGGCGCTCTACGACCTGGGCGTCCGCGACGACGCGGCGCTCGACGCTGCGCTCGGCGCCCCCGTGCAGGTGGACGTGGGCGGCACCACCATCGCCCCGCAGTTCGCGCTGGCCCGGGCGCTGGCCGGCTGGCTCCCGACCGACGACCTGAGCCGCGCCCAGGCGACGGCCCTGGCGCGCCTCGCCGTTGCGCTCCCGAAGTCGATCGACAAGCTCGACTTGGACCCCGCCGACCGCGACGCCCTGCGCGGCCTGCTCGACCGCAAGTCCGACCCGACCCGCACCAACCGCCCCGACTCCGGGAAGGTCGCCAGCGGCCAGTTCAAGCTCGCCGGCGTCGTGCGGCTGCTCACCGAGGCCGAGCGGAAGAAGGCCGACCCGTTCGCCGGCTGGGAGCTCGCCGAGAGCGACGCCTACCTGACGCCGGCCGGCGGCGAGACGGTACTCGACCAACTGCCGTGGGTGAAGAACACCGGCGTCCACTCGGTCGAGGTGCGGGTGCGGCCGGGCGGCGACATGCCGGCGGTGGTGGCGGCGGCGGAGGAAATGGGCTTCGGCACGTTCTCGGCGCTGCGGTGGTACAGCGCGGCGAAGCGCGAGGTCACGCTCGTCGCCGGCGGGCTGAACCTGTTCGCGCTGATCGGCCTGCTCGTGGCCGGGGTCGGCATCACCAACACGCTCGTCACCAGCGTGGTCGAGCGGACGCGCGAGATCGGCATCCTGAAGGCCGTCGGTGCGACGCGCGGCCAGGTCACCGGCCTGTTCCTGACCGAGGGCGCCGCGATCGGCCTGACCGGCGGGCTGCTCGGGCTGGCGGCGGCGGTGGCCATCTCGTACCCGGCCGACGGGTACGTCCGCGGGCTGATCCGCGGGCAGATGGGGAACCACGAGATGAAGACGACGACGATCTTCGAGTTCCCGTGGTGGCTGCTCGTGGGCGGGGTGGTGTTTGCGGTGCTCATCACGACCCTGGCGGCCCTCTACCCCGCCCGCCGCGCCGCCCGCATCGACCCGATCCTGGCGCTGAAGTACGAGTGA
PROTEIN sequence
Length: 527
MNLIQAIRFALGGLWRQKVRTALTLVGVAVGTAALVFSLSLGIGLRAFIDREFRERDAFWRVTVRVADPTPDPEKVPPEKVEVTGAIDPERRARLREALARRYLRDELRTPPKPLDKAAVAALEALPDVSEVRIVRSSNGRAWLADRSAPAFVVSAKLDSLTPRLIAGTLPVDDSGVVLSELALYDLGVRDDAALDAALGAPVQVDVGGTTIAPQFALARALAGWLPTDDLSRAQATALARLAVALPKSIDKLDLDPADRDALRGLLDRKSDPTRTNRPDSGKVASGQFKLAGVVRLLTEAERKKADPFAGWELAESDAYLTPAGGETVLDQLPWVKNTGVHSVEVRVRPGGDMPAVVAAAEEMGFGTFSALRWYSAAKREVTLVAGGLNLFALIGLLVAGVGITNTLVTSVVERTREIGILKAVGATRGQVTGLFLTEGAAIGLTGGLLGLAAAVAISYPADGYVRGLIRGQMGNHEMKTTTIFEFPWWLLVGGVVFAVLITTLAALYPARRAARIDPILALKYE*