ggKbase home page

SCN18_30_10_14_R2_B_scaffold_932_17

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 20569..21819

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 329.0
  • Bit_score: 352
  • Evalue 4.50e-94
dihydrouridine synthase DuS n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C52C4 similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 321.0
  • Bit_score: 389
  • Evalue 2.40e-105
dihydrouridine synthase DuS similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 329.0
  • Bit_score: 352
  • Evalue 9.10e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → Bacteria

Sequences

DNA sequence
Length: 1251
GTGGGCCATGCTGAGGACCACGCCCTCGGCGGGCTGCACTTCGTCCGCCGGGAATGGCTGCCCACGAGCCCGGCCGAACCCACCACTGCAACTGACCGCGGACCGGGCGACTCTACAGAGGCGCCGAGTTGGGGGCGGTTCACGGCCCGCCGCGTGGGCGTGTCCGGCGCCGGCTGCGGGTGCTACACCAGTCGGATGCTCGACCCCGAAGCCCCCGCCCTGGTCCTGGCCCCGATGGAAGGGGTGACCGATGCCGCCATGCGGGCCGCCCTGGGTGAGTCCGGAGCGTTCACCTACGCGGTCGCCGAGTTCCTCCGGGTCGCCAACAGCGTTCCCGGCCCGGGCGTGGTCCGCCGGCACGTGCCCGAGTTGTTCACCGGGGGGCGGACCGCGACTGGGCTGCCCGTCCAGGTCCAGCTTCTCGGCGGCGACCCCGGGCGGGTGGCCGATGCGGCGGCCGTCGCCCACGCCGCCGGGGCGGCCGCCATCGACCTGAACTTCGGGTGCCCGGCCAAGACCGTCAACCGGCACGACGGCGGGGCCGCCCTGCTCCGAAGCCCGCCCCGTATCCGCGCCGTGGTGGCCGCCGTCCGGGCCGCCCTCCCGCGGGCCGTGTCGGTGTCGGCCAAGGTCCGGCTCGGGTGGGACACGCCCGACGCGATCGACGCGGTGGCGGCGATGGCGGCCGAGGGCGGGGCGGCGTGGCTGACGATCCACGGCCGGACCCGGGCGGCCGGGTACGCCCCGCCGGCCTTGTGGGGGCCGATTGGACGGGTGCGGGAGCGGCTTGGGCTGCCGGTGGTGGCGAACGGGGACATCTGGACGGTGGCCGACCTCCGCCGGTGCCGGGACGCGACCGGGTGCCGGCACTTCATGGTCTGCCGGGGGGCTCTGGCCGACCCGCGGCTGCCCCGGCTCGCGGCGGCCGAGCTCGGTCTTGCCCCGACCGTGCCGGCCGACGAGGCGGCCCGCCCGGCGGACTGGGCGGCGGCGCTGGGGCGGCTGGTGTGGTGGGCCGGGCGGTTCCCCGGTGGCACCCCCGAGGGGGTGGTCCGCCGGCTGAAGCAGTGGCTCGCCCTGGCGGCCCGGCACGGGGGCTTCGCCGGGTTCGAGGCGGTGAAGCGTGCGAAGACGGTGGCCGACCTCCTCTCCGGGGTCGGCGCCGCGAGCCAGCACGCCCCCGAACTGGACCTGCGCTCGATCGGTGATACTTCCGGGGCGAGTGCCGGGGGAGAGTGCGGTAAGCCTTAG
PROTEIN sequence
Length: 417
VGHAEDHALGGLHFVRREWLPTSPAEPTTATDRGPGDSTEAPSWGRFTARRVGVSGAGCGCYTSRMLDPEAPALVLAPMEGVTDAAMRAALGESGAFTYAVAEFLRVANSVPGPGVVRRHVPELFTGGRTATGLPVQVQLLGGDPGRVADAAAVAHAAGAAAIDLNFGCPAKTVNRHDGGAALLRSPPRIRAVVAAVRAALPRAVSVSAKVRLGWDTPDAIDAVAAMAAEGGAAWLTIHGRTRAAGYAPPALWGPIGRVRERLGLPVVANGDIWTVADLRRCRDATGCRHFMVCRGALADPRLPRLAAAELGLAPTVPADEAARPADWAAALGRLVWWAGRFPGGTPEGVVRRLKQWLALAARHGGFAGFEAVKRAKTVADLLSGVGAASQHAPELDLRSIGDTSGASAGGECGKP*