ggKbase home page
Advanced Search
Search Help

SCN18_30_10_14_R2_B_scaffold_885_4

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2052..7259)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
WD40 repeat, subgroup n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3D7_ISOPI similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 817.0
  • Bit_score: 520
  • Evalue 6.30e-144
WD40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 817.0
  • Bit_score: 520
  • Evalue 1.80e-144
WD40 repeat, subgroup {ECO:0000313|EMBL:ADV63647.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 817.0
  • Bit_score: 520
  • Evalue 8.90e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 5208
ATGCCCGCCCCGTACCACGTCCGCCTTGCCGTCTCCCAGTACGGCGACCAGTTCCGGGCGGAACTCTTCACCGAGGACCTCGGCGACACCGAGGGCGACGTGCTGAGCGAGCTCCCCCCCAGCATCGCGGAGTGGGTGCCGTTCCTCGCGCAGGGCGCCGACCTGCCGCCGGACGCGGCGCGACAGCTCGGCAAGGACCTGTTCGCGGCCCTGCTCGGCCAGGCCGAGAACGGCAAGAAGTGGACGGAGGTGCTGGCCCGGGCGCGGGCGGCGGGACAGCCCGTCCGGCTCCTCATCGACGCCACCACCGAGGCCGTCCGCGACCTGCCCTACGGCTTGCTCTGTGAGCCGAACGACGACTGGTTCCTGTTCCGCGACGGGAAGGGGAATCCGGTCCGGTTCGTCCGCATTCTCCGCCGCTGCTCGCCGCGGCCGCTCACCCTCGGGGAGCGGCCGCGCGTGCTGGTCGCAGTCGCGGAGCCGGTCGGCGCCGACGTGCCCGCGTTCGGCGCCCCGGGTCGGCTGAGGGCGCTGTGCGCGGCCCTCCGCGGGTCCGCCGATGTGTTCCTGTGCGGGCCGACCGGCGCGATCCCGCTGGCCGACGTCACGGACTTCGCCGCGTTCACGCGGACCACCCGCGAGGCGCTGCGGGCGGCGGTCGCCGGCGATTTCGGGGTGTTCCACCTGCTCGCGCACGGGCACGGGGCCGGCGTGCTGCTGTGCCGGCCCGACGGCTCGCCGGCGGAGACGACCGCCGGGGAACTCGCCGAGTGGTGCGGGGCGGGGACGGCGGGGCTGGCGTTCCTCCAGGTGTGCAAGGCCGGGCAGACCGGGGGCCGGGGCGGGTTCGGTGGCGTCGCGCAACAGCTCCTCAGCCCGCGCGGCGGGAACCTCGCCGCGGTCGTGGCGTCCACGTTCCCGCTCGACGCCGAGCACAGCACCACCGCCGCAGCCGGCTTCTACCGGGCGCTCGCCGCCGGGAAGTCGCCGGAGGACGCGCTGACGGCGGACGTCCCCGAGACGGAGTGGACGTGGGCGTTCCTCGAACTGTGGGCGCGGCCGGGGGCGCTGGGCGGGACGCGGCAGCGGGCGGCGTTCCAGTTCGTGTCCCCGTACCGCGGCCTGTCGAGCTTCACCGAGCGCGACGCCGACCTGTTCTTCGGCCGCCGGGCCGAGGTGTCGGAGTTGCTGCAGATCCTGCGCTCCGAGCCGGCCGTCGGCGTGGTCGGGGACTCGGGGAGCGGGAAGACGTCGCTGCTGCAGGCGGGGCTGGTGTACGCCGTCCGCCAGGGCGGGCTCGCGGGGCTCGACCGGTGGCGGGTCGTCTCGCTGCGCCCGGGCTACCACCCGGCGCAGGCGCTCCTCGCGGCCCTGTGCCCCGGCGCCGCGGCCCCCGCGACCCCGTCCGGGCTCGCCGCGGCGCTGCGCGCCGACGGCCGGCCGCTCCTCGTCATCTTCGACCAGTTCGAGGAGGTCTTCACCCTCGCCCCGGACCCGGTCGAGGCGAGGTTGATGACGCGGGCGCTCGCGGACCTGGCGGCCGAGCGGCCGGACCGGTTCCGGCTGGTGATCGGCATGCGGAGCGAGTTCCTCGGCCAGTCGGCCGGGCTGCCGGGGTTGAGCGCGCTCCTCCGCCGGCCGTGGGTGCTCCGCCCGCCGAGCGCCGAGCACCTCCGCGACATCGTCGCCGGGCCGGCGGCGCACTGCGGGTACACGTTCGAGGGGCCGCTGGCGGACGGCCACCCGGACCACGCCGTCGGGCTCCTCGACCGCATCCTCGCCACGCCCCTCCTCGCCGCGACCGACGGCGCGGCGCCCTCGCTCCCGCTCCTCCAGTTCGCCCTCGAGCGGCTCTGGCTCAAGGCCGTCGAGAAGGGGCAGACGGAATTCACGCATTCCGAGTACGACGCCCTCGGCGGCCTCGGCACGGCCATCGCCCAGCACGCCGAGGACGTGTACCAGGCGACCCCGACCGTCACCGGGCTCGGCCCGGGCGCGCGGGCGGTGGCGGAGCAGGTCGTCAAGGCCCTGGTGAGCAGCCGCGGGACGCGCCAGCCGCGGCCCCGGGCCGATCTCGAGGCCGAGACCGGGAAGCCCGACGCGGCCCGGGCGGTGATCGACTACTTCGTCGGCGAGCGGCTGCTGACGATCCGCAGCGACCCGGGCGACCTAACCTCGACGTTCGTGGATCTGTCGCACGAGGCGCTCCTCCGCCACTGGGACCGGCTCCGCGGGTGGCTGGCCGAGGACCCCCAGGGGCGGGCCCTCCGCGAGGAGTTCCGCGCCGCCATGGAGCGGTGGGAGGCCGGGGCCGGCGGCGGCCCGCCGCGGGGCGCGCGGGGGCTGCCGAACGCCGACGTGGCCCGGAACTACCTGACCTGGACGGCCGCGTTCGTGGCCGCGATGCGCGCGCAACTGGCCCGCCAGAAGCGCGTCCGCGGGGCGGTGACGGCCGTACTCGCCGGGCTCGCCACGGCGGCGTGCCTCCTCGCCCTGCTGGCCGCCAGCCAGGCCGGCCTCGCCCGGAAGAACGAGGGCGAGGCGAAGAAGAACGAGGCGCTGGCCAAGGCCAGCGAGGCGGCGGCGCAGGACAACGCCCGGAAGGCGAAGATCCGGGCCGCGACGATGGCCCTGGACCGCGGGGTCGCGCTCTGCGAGCAGGGGCGGCCCCGGTTCGGGATGCTCAGCATGGCGTACGGCCTCCAGGTGTGCCCGCCGGGCGACACCGGGGCCGACGCCGCCGCGCTCCGCAAGGCGATCCTCGCGAACCTGTCCGGCTGGGCCGTCCGCCAGCTCTGCCTGGACGACGTCCGCACCTTCCCCAGCCCGGCGCTGGCGACGGACCCGGACGGCCGGTACGTCCTGTGCCGCCACCCCGACGGCGCCCAGCTCTACGACATCGACGGCCCGCCCGGCGCGCCCCCGGCGGCGGTCGGCAGGCGGATCCCGAACCTGTCGACCACGACGCCGACCGTCGACGTCTGGGGCGCCGTCCACCGCGACGGCCGGACCGTGCTCGTCTCCGACGGCGCCGGCTCCGCCCGGCTCTGGGACGCGGCCGAGGGCAAGCCGCTCGGGGCCGAGTTCAAGACGCACGGGGTGGGGCCGGCCGTCCTGAGCCCCGACCGGAAGACGGTCGCGACGACCAACACCGTCGGCACGGTGAGCGTGTGGGACGCCACGTTCAAGGGCCACCCCGGGGCGAACCAGAAGCACGAGGGGAAGAAGCTCTTGCCGGATCAGACGCACCAGGGGAAGGTGTTCGCGATCGAGTTCAGCCCGGACGGGGCGCTCATGGCCACCGGGTGCGGCCGCGGCGCCAACGCCCCGTCCGGGAGCGCCGGCGTCTTCCACCTCGTGAACACCGCGGACGGCCAGGTCCTCCGGCGCTTCCCGCTCGACGTCATCGTGACCGCCGTGGGGTTCAGCCCGGACGGGAAGCAAGTCGCGGCCGGCGGCATCGTCGTCTACGTGATGAACACCGCCGAGGCCGCCAACCAGGTAGAGCACAAAGAGCTCAAGTACCTGAGCAAGCGGTCGAGCCCCGAGCACACCGTCCGGGCGGTCTTCGACCCGAAGAACGCGGACCACCTCCTCGCGGTCAACCCGTCCGGCGGCATGGCCATCACCCACGCGAAGGAGAAGCACTTCGGGTCCGGCGAGCGGCTGTCGCCGCAGGGGTGGCTCGTCGGCGTCGGCCTCCGCCCGGACGGGTCGGTGTTCACCGCCAACATCGACGGCACGGTGCGCCTGTGGGGGCGGCCCGCGCGCGAGCACTCGTCGACGAAGTTGCTCCTCCCCCTCGGCAAGGAAGGCAAGGTCGTCAACAACGTGCTCTCCCTGGACGTGAGCCCGGACGGAACGGCGGTCGCCGCCAGCACCCGCAACGGTCGGGTGTACCTCTACCACCTTGACGGGCGGGCCGGGCCGACGGAGTTTCTGTGCTCCGGGGGGCCGGACGGCCCGAAGGCGAAGGGCGCGCGGCAGGTCGCCGAGGTCGAGTTCAGCACCGACGGCAAGCGCCTCATTGCCCACGACATCACCTTCCGCACCTTCGTCTTTGACATCCCGCCGCCCGGAACGCCGGGGCCGGTTTCCCCGAGGAGGACCGACCTCCTCGCCGCCTGCCCCGACGGGCGGCTCGCGGTCGTGCGGGCGCCGATGCCGTCCCGCTACGCGCTGGTCGACATCGACACCGGACGACCGTTGTGCGAGATCGCCGTCCCCGACGGGCTCGGCCCGCCGGCGGACGAGATGGTCGACGACGGGTTCCTCCTGCGCGTCCGCGCGGTGGCGTTCAGCCCGGACCGGAAGCGGGTCGCCATCGCCGCACGCGACGGCACGGTGCAGGTGTTCTCGACCGAGACCGGGGCGAGTGTGGTCGGACCGATCGAGCACCGCGTCGACGGCATGCGCGACAACGTCCGGGCGGTCGCGTTCAACCCGGCCGGCGACCGCCTCCTGACGCGCAGCGCGCGCGGCCGCGGCCTCTGGCACGCCGCCACCGGGGCGCCGGTGAACCTCCTCCCGAACCGCGTCGGCATCCAGCTGTCGCGGTTCAGCCCGGCCGGGCGGCTGGTGCTCGGGGGGACGAACTTCAACTCCGGCGAAGTGTGGCACGGGGACGACGGTCGGGAAGCGGTCCCGCTCCCGCTCGTCCACGCCAGTGAGGTGTGGGGGATCTCCGCGAACCGGGCGGAGACGCAGGTCATCACCGCGAGCTACGACCAAACGGCCCGGGTGTGGGACGTGGCGACCGGGAAGCCGGTCTCGCCCCCGTTCGTCCACGACAGCGGGGTGAGCGACGCCGAATTCACCCCGGACGGGAAGTGGGCCGTGACCGGCAGCTGGGACGGCACCGTCCGCATCTGGCCGATCCCGACCCCGATCCCGGACGACGAGCCCCGGATCACGGCGTGGGTGGAGGTACAAACCGGGCTCCGGGTCACCCCGAGCGGGATCGGCGCGCCCCTCGACGCAAGGGAATGGCATGAGCGTCGGGCCGAGCTCACCCGGCTCGGCGGTCCCCCATCCGGGCTTTTCCCCCGAGGAGCGGACGGGACGGGGACGGAATCTCGTCGCAATGGCCCCCGGCGACGATTGGGGTCGAGACGGCGATCACGACGATGCCTCGCTCGACTGGCGGGGGCTCTCGCCTTGATCAAGGTCGCCTGCTGGGGGCAAGAAAACCGGATAGAAGGTCGGTAG
PROTEIN sequence
Length: 1736
MPAPYHVRLAVSQYGDQFRAELFTEDLGDTEGDVLSELPPSIAEWVPFLAQGADLPPDAARQLGKDLFAALLGQAENGKKWTEVLARARAAGQPVRLLIDATTEAVRDLPYGLLCEPNDDWFLFRDGKGNPVRFVRILRRCSPRPLTLGERPRVLVAVAEPVGADVPAFGAPGRLRALCAALRGSADVFLCGPTGAIPLADVTDFAAFTRTTREALRAAVAGDFGVFHLLAHGHGAGVLLCRPDGSPAETTAGELAEWCGAGTAGLAFLQVCKAGQTGGRGGFGGVAQQLLSPRGGNLAAVVASTFPLDAEHSTTAAAGFYRALAAGKSPEDALTADVPETEWTWAFLELWARPGALGGTRQRAAFQFVSPYRGLSSFTERDADLFFGRRAEVSELLQILRSEPAVGVVGDSGSGKTSLLQAGLVYAVRQGGLAGLDRWRVVSLRPGYHPAQALLAALCPGAAAPATPSGLAAALRADGRPLLVIFDQFEEVFTLAPDPVEARLMTRALADLAAERPDRFRLVIGMRSEFLGQSAGLPGLSALLRRPWVLRPPSAEHLRDIVAGPAAHCGYTFEGPLADGHPDHAVGLLDRILATPLLAATDGAAPSLPLLQFALERLWLKAVEKGQTEFTHSEYDALGGLGTAIAQHAEDVYQATPTVTGLGPGARAVAEQVVKALVSSRGTRQPRPRADLEAETGKPDAARAVIDYFVGERLLTIRSDPGDLTSTFVDLSHEALLRHWDRLRGWLAEDPQGRALREEFRAAMERWEAGAGGGPPRGARGLPNADVARNYLTWTAAFVAAMRAQLARQKRVRGAVTAVLAGLATAACLLALLAASQAGLARKNEGEAKKNEALAKASEAAAQDNARKAKIRAATMALDRGVALCEQGRPRFGMLSMAYGLQVCPPGDTGADAAALRKAILANLSGWAVRQLCLDDVRTFPSPALATDPDGRYVLCRHPDGAQLYDIDGPPGAPPAAVGRRIPNLSTTTPTVDVWGAVHRDGRTVLVSDGAGSARLWDAAEGKPLGAEFKTHGVGPAVLSPDRKTVATTNTVGTVSVWDATFKGHPGANQKHEGKKLLPDQTHQGKVFAIEFSPDGALMATGCGRGANAPSGSAGVFHLVNTADGQVLRRFPLDVIVTAVGFSPDGKQVAAGGIVVYVMNTAEAANQVEHKELKYLSKRSSPEHTVRAVFDPKNADHLLAVNPSGGMAITHAKEKHFGSGERLSPQGWLVGVGLRPDGSVFTANIDGTVRLWGRPAREHSSTKLLLPLGKEGKVVNNVLSLDVSPDGTAVAASTRNGRVYLYHLDGRAGPTEFLCSGGPDGPKAKGARQVAEVEFSTDGKRLIAHDITFRTFVFDIPPPGTPGPVSPRRTDLLAACPDGRLAVVRAPMPSRYALVDIDTGRPLCEIAVPDGLGPPADEMVDDGFLLRVRAVAFSPDRKRVAIAARDGTVQVFSTETGASVVGPIEHRVDGMRDNVRAVAFNPAGDRLLTRSARGRGLWHAATGAPVNLLPNRVGIQLSRFSPAGRLVLGGTNFNSGEVWHGDDGREAVPLPLVHASEVWGISANRAETQVITASYDQTARVWDVATGKPVSPPFVHDSGVSDAEFTPDGKWAVTGSWDGTVRIWPIPTPIPDDEPRITAWVEVQTGLRVTPSGIGAPLDAREWHERRAELTRLGGPPSGLFPRGADGTGTESRRNGPRRRLGSRRRSRRCLARLAGALALIKVACWGQENRIEGR*