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SCN18_30_10_14_R2_B_scaffold_1121_16

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(10303..11958)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PHC0_RHOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 210.0
  • Bit_score: 122
  • Evalue 7.20e-25
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 319.0
  • Bit_score: 136
  • Evalue 1.80e-29
Uncharacterized protein {ECO:0000313|EMBL:BAH55219.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 319.0
  • Bit_score: 136
  • Evalue 8.80e-29

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Taxonomy

SCNpilot_P_inoc_Acidovorax_64_34 → SCNpilot_P_inoc_Acidovorax_64_34 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGAGCATTGAAGAAGTAGTGTATTCCCGACTCACCTCCGACGATACGCTCGTCGGCATGGTGGCCTACATCAGGCCGACCGAACCCGCCGAGAACGACGACGCCCGCCCCGAACTCGTCTACACCATCACGTCCGACGAAGTTGAACTCTACCTCTCCGGTGAGTCGTCCACCCTCCACAAGTACGGACTTCAGATCGACTGCTGGGCAACCGATCTGAACAGCGCCCTGAACGTGCTCGCCCGAGCCAAGATCGTGTTGGACGGGTGGCGGGGCGGGACAGTCAGTTGGTGCAAGTACGAAAGCCAGAGCGACGCCTACAGCGACCCCGGTTTCGTCGCCACCCACACGTACACGCTTTGGGCGAACACCGCCAACGTCGTTGCACTCCCGGACTCCACCGGGGCCGTGACCACCGGAAACAACTTCGTCGAGCTCGCCGCCTGCGAGCACGTCCTCCGGGTGGACTGTAGCGGCTTAACTTTCGACGGGGGGCCGATCGAGGGCGGCGGGGGCGAACAAGGACCAGCGGGCGAGGACGGGGCCAGCGCCTACGACGTGGCCGTGAGCAACGGGTTCAGCGGCACCGAAGAAGAATGGCTGGCGTCACTGGTAGGACCGCAAGGCGAACCCGGAAGTGACGGGGCCGATTCGACCGTACCCGGACCACCGGGCGAGGACGGGGCCGACTCCACCGTACCGGGACCAGCCGGGGCCGATGGTGCGGACGGGGCGAGCGCCTACGAGGTGGCACTCGCCAACGGGTTCAGCGGCACCGCTGAGGAGTGGTTGGCGTCGTTGGTCGGGCCGCAAGGCGAACCCGGAGCTGATGGGGCCGACTCCACCGTACCGGGACCGAAGGGCGACACCGGGGACACCGGTCCCGCTGGCCCGAACACCGTGACCACATCGACCACCACCAACCTGACGGGCTATTTGAAGGGTAACGGCTCGACGATATCCGCCCAATCGGCACCCCTGCCAATCACCGAGGGCGGCACCGGCGCGAACAACGTCATCGACGCCGTAGACGCTCTGGGCCTGACGATCGGCGCTCAGGTTCAGGCTTACGACCCCGACCTAGCCGCAATCGCAGCCATCAGCTCAAACGGCGTACTGCGACGCACCGCCGCGAACACGTGGGGCACATACACCCCGGTCCCCTTCTATCAGACCGCAGACGTGACTGTGGCAAACACCAGCTCGGAAACCACCGTGACGGGTAGCGGTGTCGGTAGTCTTACCCTCGCGGCAAACTATCTGGCCGTCTACAGAGTATTGCGTGTCAAGGCGTTAGGGTACTGGGCCAGTACCGGGAGTCGGGCACAGTGGCGCATCAAGCTCGGCAGTACCACGCTCGCAACGAACGGCACGGGTGCGGTGTTCCTCAGCAACGGGGCAAGCGGGTTCTGGGAGGCCGAGTTCACGCTCATATGTCGCACTGGGGGCAGTAGCGGAACCATTATCGGCGGGGGCCAACTCGAATACGTGACCAGCATCGGAAGTGCCACCCAGTCCGAGCCGTTCACCATGACGAATACGACAACCATCGACACCACTGCAACCCAGACGGTAGACCTGACAGTGGCATGGGCCGTGGGCGCATCGGGCAACACTCTGACCTGCACCACGCTTACAGTCGAATCGATGTACTAA
PROTEIN sequence
Length: 552
MSIEEVVYSRLTSDDTLVGMVAYIRPTEPAENDDARPELVYTITSDEVELYLSGESSTLHKYGLQIDCWATDLNSALNVLARAKIVLDGWRGGTVSWCKYESQSDAYSDPGFVATHTYTLWANTANVVALPDSTGAVTTGNNFVELAACEHVLRVDCSGLTFDGGPIEGGGGEQGPAGEDGASAYDVAVSNGFSGTEEEWLASLVGPQGEPGSDGADSTVPGPPGEDGADSTVPGPAGADGADGASAYEVALANGFSGTAEEWLASLVGPQGEPGADGADSTVPGPKGDTGDTGPAGPNTVTTSTTTNLTGYLKGNGSTISAQSAPLPITEGGTGANNVIDAVDALGLTIGAQVQAYDPDLAAIAAISSNGVLRRTAANTWGTYTPVPFYQTADVTVANTSSETTVTGSGVGSLTLAANYLAVYRVLRVKALGYWASTGSRAQWRIKLGSTTLATNGTGAVFLSNGASGFWEAEFTLICRTGGSSGTIIGGGQLEYVTSIGSATQSEPFTMTNTTTIDTTATQTVDLTVAWAVGASGNTLTCTTLTVESMY*