ggKbase home page

SCN18_30_10_14_R2_B_scaffold_965_19

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 16362..16883

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B1B similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 170.0
  • Bit_score: 262
  • Evalue 1.80e-67
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 161.0
  • Bit_score: 134
  • Evalue 1.60e-29
Tax=RBG_16_Planctomycetes_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 174.0
  • Bit_score: 150
  • Evalue 1.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → Verrucomicrobia

Sequences

DNA sequence
Length: 522
ATGGGCTCCGTCGGCGGGTTGCACCAGCTGATCGACGAGCACTATCAGGGGCTCTACCGGTACGCCTACCGGCTGTCGGGCTCGGCGGCGGACGCCGAAGACCTGACCCAGGAGGCGTTTCGGAAGGCGATCAACAAACTCCCCCAGCTCCGCGACCCAGCCCGGGCAAAGGCGTGGCTGTTCCGCATCCTGCGGAACGCCTACCTCCACCGAGTCCGGGACGCGAAGCGCCACCGGGCGGTGCCGCTCGACGCGGTGGGGGACTTGCCCATGCCGGCCGCCGACGAGCCGCCGGACATCGACCCGGCCCGGTTGCAGGATGCCCTGAACGAGCTGGACGAGGCATTCCGCACGCCGTTGATCTTGTTTTACTTCGAGGATTTCAGCTATCGGGACATCGCCGAGCAGATGGACCTCCCCATCGGTACGGTGATGTCCCGGCTTGCCCGTGGGAAGGTGTACCTCCGCTCCCGGCTCTGTCCCGCCGGCGAGGCGAACGGCCACCTCCCCCATCCCGCCTGA
PROTEIN sequence
Length: 174
MGSVGGLHQLIDEHYQGLYRYAYRLSGSAADAEDLTQEAFRKAINKLPQLRDPARAKAWLFRILRNAYLHRVRDAKRHRAVPLDAVGDLPMPAADEPPDIDPARLQDALNELDEAFRTPLILFYFEDFSYRDIAEQMDLPIGTVMSRLARGKVYLRSRLCPAGEANGHLPHPA*