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SCN18_30_10_14_R2_B_scaffold_1172_12

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(5994..6419)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45B3 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 91.0
  • Bit_score: 124
  • Evalue 4.80e-26
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 90.0
  • Bit_score: 93
  • Evalue 3.40e-17
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:ADG67420.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 90.0
  • Bit_score: 93
  • Evalue 1.70e-16

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGGGCAGAGATCTGACCCGGTTGCCTTCCCTGGAACAGGTGCGCACGGGCCGGAGTCGTGTCCACAACAATCGCCTGATGATATCCATATCGACCCGCACCATCGGTCTGGCTCACCGAGAAGCGTTCGGTCCGCCCCGTCATCGCCGCGAGACTGCGCTCACTCCGGACAACGCCACCGCCGACGAGCTGCGCGAGATGTTCTCCGCGCACTGGCGGGTGATCGCGACCGTCTGCACCGACCGCGAGACCGGCAGCAGCCGGGGCTTCGGGTTCGTCGAGATGGCGGAGGGCACAGACGAGGCGATCCAGGCGCTGAACACGGCGGTGTTCGCCGGCCGGGCGCTGACGGTGAACGAGGCCAAGCCCCGCGAGGGCGGCCGCCCGGCCGGCGGCAACCGCTCCGGGTACGCCCGCAGTTACTGA
PROTEIN sequence
Length: 142
MGRDLTRLPSLEQVRTGRSRVHNNRLMISISTRTIGLAHREAFGPPRHRRETALTPDNATADELREMFSAHWRVIATVCTDRETGSSRGFGFVEMAEGTDEAIQALNTAVFAGRALTVNEAKPREGGRPAGGNRSGYARSY*