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SCN18_30_10_14_R2_B_scaffold_1224_13

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(15322..15831)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG68_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 203
  • Evalue 9.80e-50
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 203
  • Evalue 2.80e-50
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28262.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 203
  • Evalue 1.40e-49

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Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
GTGGCTGACGACGCAGAGACGCTGTTCCGAAACTGGCTCGCCGAGCACCGGGGCACCGTCCTGAGGGTGGCCCGCGCCTACACGGCCACGCCCGCGGACTGCCAGGACCTGACCCAGGAGATCCTGCTCCAGGTCTGGCGGTCACTGCCGCTGTTTCAGGGCCAGGCCCGCTCCACGACCTGGTGTTACCGCGTGGCCCTGAACACCGCCCTCGGCTGGCGCCGCAAGGAGCGCCGCCGGCAGACCCGGCAACGGCCGTTGCCCGACGCCGAGAACCTGGCGGCCCCCGAGGAGATTGCCCCGCAATCGGACCTCGTGGACCGCCTCTACGCCGCGATCCACCGGCTGACGGGAGCCGATACCGCGCTCGTCCTGCTACACCTGGACGGCCTGAGCTACCGCCAGATGGCCGACGTGCTGGGCATCACCGAGGGCCACGTCGGCGTGAAGCTGACGCGGGCGAGAAGGGCCCTGGGGGAGCTGATGAAGGAAAAGGCCGATGCCGAGTGA
PROTEIN sequence
Length: 170
VADDAETLFRNWLAEHRGTVLRVARAYTATPADCQDLTQEILLQVWRSLPLFQGQARSTTWCYRVALNTALGWRRKERRRQTRQRPLPDAENLAAPEEIAPQSDLVDRLYAAIHRLTGADTALVLLHLDGLSYRQMADVLGITEGHVGVKLTRARRALGELMKEKADAE*