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SCN18_30_10_14_R2_B_scaffold_997_52

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(60487..61071)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q8U8_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 193.0
  • Bit_score: 206
  • Evalue 1.30e-50
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 193.0
  • Bit_score: 206
  • Evalue 3.80e-51
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACF01932.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 193.0
  • Bit_score: 206
  • Evalue 1.90e-50

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCCGTCGGGACGTGTGCGGGAGTTCGACGCGGACGAGGCCCTCGACCGGGCGATGGGGGTGTTCTGGCGGCACGGGTACGAGGGGACCTCGCTCGCCGACCTGACGGCCGCGATGGGGATCAACCGGCCGAGCCTGTACTCCGCCTTTGGGAACAAGGAGCAGCTCTTCCGCAAGGTCCTCGACCGCTACCAGGCGGGGCCGCTGGGGTTCGCGGCCGCCGCGCTGGAGATGCCCACCGCGCGGGGGGTGGTGGAGGCGTTCCTGGACGGGTTCATCCGGTGCATCCGGGGCGGCCCGGCCCCGGGGTGCCTGGTGGTGTCCGCGGCGCTGGTGAGCGGGGAGGACGCGGAGCCGGTCCGCCGGGAACTGGCCCGGTTGCGGCGGGGGACGGTGGCGGCCCTGCGGGGGCGGTTCGAGCGGGCGGCGTCCGAGGGCGACCTGGCGGCGGGAACGGACTGCGGGGCGCTCGCCCTGTACGTGGCCGCGGTCCTCGACGGGCTGGCGGTGCTAGCGGCGAGCGGGGCGACCGAAGTGGACCTGGGGCGGGTGGCCGAACTGACCATGCGGCTGTGGCCGTCCTGA
PROTEIN sequence
Length: 195
MPSGRVREFDADEALDRAMGVFWRHGYEGTSLADLTAAMGINRPSLYSAFGNKEQLFRKVLDRYQAGPLGFAAAALEMPTARGVVEAFLDGFIRCIRGGPAPGCLVVSAALVSGEDAEPVRRELARLRRGTVAALRGRFERAASEGDLAAGTDCGALALYVAAVLDGLAVLAASGATEVDLGRVAELTMRLWPS*