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SCN18_30_10_14_R2_B_scaffold_1334_14

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(18873..19448)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D633_PAESJ similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 190.0
  • Bit_score: 142
  • Evalue 3.90e-31
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 190.0
  • Bit_score: 142
  • Evalue 1.10e-31
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 187.0
  • Bit_score: 170
  • Evalue 1.90e-39

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCGAGCGTGACACACGCGGAGAGCTTCTGGATCTGGCCGAAAAGCTGGTACGGACTCGGGGTTACAACGGGTTCAGCTACCGCGACCTGGCCGGGCAAATCGGGATCAAGACGGCGAGTGTCCACTACCACTTCCCGACCAAGGGTGATCTGGGTGAGGCTATGGTCGAGAACGAGAGGGAGTTGTTCGCCAGGAACCTCGCCCGGCTCGACGCCGAGGAGAAGGACCCGCAGCGGCGGCTGGAGCGGTTCATTCAGCTCTTTCAGGCCAGCACGATCGGGTGCGACAACCGGATGTGCCTGGGGGCCATGCTTGCGGTCGAGCAGGAGACCTTGCCGGAGCCCGTCCGGCGAGCGGTGCTGCGCCTCTTCGAGCACAATGAGGCCTGGCTCGCAAAGGTGTTGGAGGAGGGACGGGAGCAGCAGACATTTCGCTTCAAAGGGCCCGCAGACGGGGCCGCCCGTTTCGTGTTCTCGGCGCTCGAAGGGGCATTGTTGATGGCCCGGGCCTTCCGCGATGTCGGCCGGTTCGAGGCCGCCACCCGCTGGATCATTGAGAGCCTGAGCGACTGA
PROTEIN sequence
Length: 192
MSERDTRGELLDLAEKLVRTRGYNGFSYRDLAGQIGIKTASVHYHFPTKGDLGEAMVENERELFARNLARLDAEEKDPQRRLERFIQLFQASTIGCDNRMCLGAMLAVEQETLPEPVRRAVLRLFEHNEAWLAKVLEEGREQQTFRFKGPADGAARFVFSALEGALLMARAFRDVGRFEAATRWIIESLSD*