ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1932_15

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 14455..15378

Top 3 Functional Annotations

Value Algorithm Source
WD-40 repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D47 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 315.0
  • Bit_score: 290
  • Evalue 1.40e-75
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49280.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.4
  • Coverage: 299.0
  • Bit_score: 113
  • Evalue 3.40e-22
WD-40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 305.0
  • Bit_score: 97
  • Evalue 6.60e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCTCGTGATGCGGGCCGGCGCACCCAAGGTGCGGATCGACGAGCTCGCCTTCTCGCCGGACGGCGCCGCGATCGCGGCGCCGGCGGGGGCCGCGGGTCTGTGCCTGTGGACCCCGCTCGCCGCGGGGACGAAGTCTGAAGTCCTCCAGCTGCCGGTCAAGGTCGTGAAGCGGGTCGCCTTCGCCCCGGACGGCCACACCCTCTACGCCGGCAACGATCGACTCTGCGCGTTCGACCTCGCCACCCGGTCCGGCCCCGTCGTCGACATCCCGCAGTGGGGGGCACTCAAGTTCGGCGTGTCCCCCGACGGAACGCGGCTGGTCGTCGCCGAGATCCAGCGGGAAACCGACGCGACCCGCATCACAGTTTGGAAGACGGGCGAGCTCGACGCCCCTCCGCTCGCCGCCACCACGCCGTCGCTCGTGTACTCCCCCCCGCTGTTCCCGCCGGCCGGTGACCGCTTCCTCCTTCTGGAAGGGACGCTGCTCCCGTCCCGGTCGTGGGAGTACCGGCGGGTCACCCGGTCGGCCGAGACCGGCGGGGTGATCGAGCAGTCGCCGCCGTTCCCCGACGACCCAGACCAGATGATCCTGTCGCCCGACGGCCGCACGGTCGCGTGCCGGACGCGGGCGGTCATCCGCGTCTACCCGGCGACCGGCGGCTGGGGCACCGACGTGCCGACGATCAAGAACGACGGCAAGCAGCACTTCACCGGGATCGCCTACCACCCGTCGGGCGAGCTCCTCGCGGCGACGAGCAACGACAAGACGGTGAAGCTGTACGACACCGCCTCGGGGGCGCTGGCGCGGACGTTTACCTGGGACATCGGCCGGATGCGGTCGGTGGCGTTCAGCCCGGACGGCCTGCTCGCGGCCGCCGGGAGCGACACCGGCAAGGTCGTCGTCTGGGACGTGGACGGGTAA
PROTEIN sequence
Length: 308
MLVMRAGAPKVRIDELAFSPDGAAIAAPAGAAGLCLWTPLAAGTKSEVLQLPVKVVKRVAFAPDGHTLYAGNDRLCAFDLATRSGPVVDIPQWGALKFGVSPDGTRLVVAEIQRETDATRITVWKTGELDAPPLAATTPSLVYSPPLFPPAGDRFLLLEGTLLPSRSWEYRRVTRSAETGGVIEQSPPFPDDPDQMILSPDGRTVACRTRAVIRVYPATGGWGTDVPTIKNDGKQHFTGIAYHPSGELLAATSNDKTVKLYDTASGALARTFTWDIGRMRSVAFSPDGLLAAAGSDTGKVVVWDVDG*