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SCN18_30_10_14_R2_B_scaffold_2004_2

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(801..1934)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QI38_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 384.0
  • Bit_score: 240
  • Evalue 2.10e-60
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 384.0
  • Bit_score: 240
  • Evalue 6.00e-61
Tax=RBG_13_Chloroflexi_60_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 360.0
  • Bit_score: 257
  • Evalue 2.30e-65

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGCCCTGGAGCACACCCACCGTGTCCGACTGCCGCACTGCCCTGATCCACGCCGTCCGCACCGCCGGGCGGACCGTCACACAGGCCTGTCGCGAGTTCGGCGTGTCCCGCAAGACGGCCTACAAGTGGCTCGCCCGCCACGCCGCCGACCCCACCGCCCCTCCCGCCGACCGGTCCCGCCGCCCCCACACCTCGCCCACCCGCACCCCCGCCGACACCGAGGCCGCCGTCCTCGCCGCCCGCGACCAGTTCGGGTGGGGGCCGCGGAAGATCGTCGCCTACCTCCGCGACCGCGGCCAACCCGCCCCGCCCGTCCGCACCCCCGCCGCCGTCCTCCGCCGCCACCACCGCGCCCGCCCCGCCGCCCCGCCCCCGGTCCCGCCCCAGCGGTTCGAGTGGCCCGCCCCCAACGACCTCTGGCAGGTCGACTTCAAGGGGCTCGTCTGGGTCGGCCGGCGCAAGGTGTTCCCGCTCACCGTCCTCGACGACCACTCCCGCCACCTCCTGGCCGCCGACCCGTGCACCGACCAGACCATGGCCACCGCCTGGGCCGTCCTGTGGCGGGTGTTCGGGGAGGTCGGGCTCCCGGCCGCCGTCCTCTGCGACAACGCGTTCGGCACCCACAACCCGGGCATCCCGACCGTGTCCTGGTTCGACGCCCAGCTCCTCCGGCTCGGGGTCCGGCCGATCCACGGGCGGGCGTACCACCCGCAGACCCAGGGGAAGGTCGAGCGGTTCCACGGCACCCTGGTCCGGGAGGTGTGGCCGACCACCCGCCGGGACGCCCTCGGCCACTTCGCGGCCGACCTGGCCCGGTGGCGGGCCGAGGTGTACAACCCGGTCCGCCCGCACGAGGCGGTGGGGGACCGGCCGCCGGCGGCCCGGTGGCGGGCGAGCCCGCGCCCCCGTCCGGCCGCGGTGCCGGCGGTCGAGTACCCGGCCGGGGCGGTGGTGCGGAAGGTGACCCCGACCGGGGACATCACCTGGCACTGCGCCCGGATCCTGGTCGGCCGGGGTCTGGTCGGGGAGTGGGTGCGGGTCGAGGAGGCCGACGGGGACGTGGTCGCCCGATACGGGGACCACCCGGTCCGGCGCGTCCCGGTGGCCACCCTCGGCTCCGGGGGTATGCTGTAA
PROTEIN sequence
Length: 378
MPWSTPTVSDCRTALIHAVRTAGRTVTQACREFGVSRKTAYKWLARHAADPTAPPADRSRRPHTSPTRTPADTEAAVLAARDQFGWGPRKIVAYLRDRGQPAPPVRTPAAVLRRHHRARPAAPPPVPPQRFEWPAPNDLWQVDFKGLVWVGRRKVFPLTVLDDHSRHLLAADPCTDQTMATAWAVLWRVFGEVGLPAAVLCDNAFGTHNPGIPTVSWFDAQLLRLGVRPIHGRAYHPQTQGKVERFHGTLVREVWPTTRRDALGHFAADLARWRAEVYNPVRPHEAVGDRPPAARWRASPRPRPAAVPAVEYPAGAVVRKVTPTGDITWHCARILVGRGLVGEWVRVEEADGDVVARYGDHPVRRVPVATLGSGGML*