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SCN18_30_10_14_R2_B_scaffold_2036_17

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(32560..33849)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 425.0
  • Bit_score: 494
  • Evalue 2.60e-137
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 425.0
  • Bit_score: 494
  • Evalue 1.30e-136
diaminopimelate decarboxylase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EC2 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 436.0
  • Bit_score: 677
  • Evalue 7.70e-192

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
GTGGACCACTTCGCCTACCGCGACCGCACGCTGTTCTGCGAGGACGTTGCTATCCCCGAGCTCGCCGAGAAGTACGGCACGCCGCTGTACGTCTACAGCGAGGCGGCGCTCGTCGGGAACCTCCAGGAAATCCAGACCGCGTTCGCCGCCGCCGACCCGATCATCGCCTACAGCGTCAAGTCGAACGCGAACCTGAGCATCTGCAAACTCATGGCGGCGCACGGCAGCGGGTTCGACGTGACCTCCGGCGGCGAACTCTTCCGGGCGCTCACCGCCGGCAGTAAGGGCTCGAAGATCGTCTTCGCCGGCGTCGGCAAGAGCGACGCCGAGATGCGCCACGGGCTCGAAAACGGCGTCTTCCTCTTCAACGTCGAGAGCGAGGCGGAGCTCCACGCGCTCGGCGCCGTCGCGCAGGCGATGGGCGTCAAGGCGCCGGTCGCGCTCCGCGTCAACCCGGACCTCCCGCCCAAGACGCACGCCAAGACCGACACGTCCGTCAAGGGCGTCAAGTTCGGCCTCGACATCGAGACGGTCGTGGACGTGGCGAAGTCGGTCGTCGGCCACCCCGGACTGGCGGTCGTCGGCGTCCACATGCACCTCGGCTCGCCGATCCTCAAGGCCGACCCCTACGAGCAGGGGGCGGCCAAGGCGGTGCAGCTCGTCAAGGCGTTCCGCGCCCAGGGGCACGACATCCGCTACCTCAACATGGGCGGCGGGTTCGGCATCAGCTACCGCAAGCAGGAGGCGCTCCCGGCGGCGGCGTTCGCCGAGGTCATCCTGCCGGCGGTGAAGGAAACGGGCTGCAAGCTCGTCCTCGAACCGGGCCGGTTCGTCGTCGGCAACGCCGGCATCCTCGTCAGCCGGGTGGTGTTCACGAAGGAGACCGGCGGGAAGCGCTACGTCATCCAGGACGCGGCGATGAACGACCTCATCCGCCCGACCCTGTACGACTCGTTCCACCGCGTCTGGCCGGTCAACCCGAAGGCCGACGTGCCGACGTGGCCGGAGGACTGCGAGGCGGCGATCCCGAACACGGTCGCGCAGGACGTGGTCGGCCCGGTGTGCGAGAGCGGCGACTTCCTGGCGAAGGGGCGGAACCTGCCGGCCCTCGCCCGCGGCGACCTGCTCGCGACGTTCAGCGCCGGCGCCTACGGGATGGCGATGGCGAGCAACTACAACAGCCGGTGCCGGGCGGCGGAGGTTCTCGTTACAGGCCGCACACACCGCCTGATCCGCCGCCGGGAGACGTTCGCGGACATTACCGCGTGCGAAGCCGATTGCCTCCGGTAG
PROTEIN sequence
Length: 430
VDHFAYRDRTLFCEDVAIPELAEKYGTPLYVYSEAALVGNLQEIQTAFAAADPIIAYSVKSNANLSICKLMAAHGSGFDVTSGGELFRALTAGSKGSKIVFAGVGKSDAEMRHGLENGVFLFNVESEAELHALGAVAQAMGVKAPVALRVNPDLPPKTHAKTDTSVKGVKFGLDIETVVDVAKSVVGHPGLAVVGVHMHLGSPILKADPYEQGAAKAVQLVKAFRAQGHDIRYLNMGGGFGISYRKQEALPAAAFAEVILPAVKETGCKLVLEPGRFVVGNAGILVSRVVFTKETGGKRYVIQDAAMNDLIRPTLYDSFHRVWPVNPKADVPTWPEDCEAAIPNTVAQDVVGPVCESGDFLAKGRNLPALARGDLLATFSAGAYGMAMASNYNSRCRAAEVLVTGRTHRLIRRRETFADITACEADCLR*