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SCN18_30_10_14_R2_B_scaffold_2608_7

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(6473..8278)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8G5_STRSW similarity UNIREF
DB: UNIREF100
  • Identity: 23.9
  • Coverage: 389.0
  • Bit_score: 60
  • Evalue 4.80e-06
rho; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 23.9
  • Coverage: 389.0
  • Bit_score: 60
  • Evalue 1.30e-06

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
GTGGTCGTCGCCGGCGGTGTACAGCCGGCCGTCGGGGCCGAAGGCGAACCCGGTGACGTGTCCCTCGTGCCCCGGGGCACCCGGGCCGAGCGACCGCCGGGTCTTTACGTCCCACGCCCACACCCGGTAGTCGGTGACCGCCGCGAGCCGGGCGCCGTCCGCCGACCAGCCGACGTGCGACGCTCTCGACCGGCCGACGGGGAACCGGCCGACTTCCGTCCAGGTCGCCGGGTCTACCAGGACGACGGCGTCGTCGCCCTTCGTCCCGGCCGACCCGAAGTTGGTCACGGCGAGCGTCCGCCCGTCCGGGCTGAACGCCCACTTCCACGGCGTGCCGCCGGGGGGGGCGAAGCTCCCGGTCTGCCGCCCGGTCGCGACGTCGAACGCGGCCACCCGGCCGTCGGTCACGGCCAGGAGGGTCTTGCCGTCGGGCGAGAACCCGGCGGCCTGGACCCCGAAGCTCCCGATCCGGGCAAACGTCTTCGGCTCCGCGCCGGTGTCCCACCGCCAGAGGAACAGGTCATACCGGCCGAAGGCGATCAGCTTCCCGTCCCGGGAGACGGCGAGGGTGCCGGCGTTCACCCGGCCCTTGTGCCGCATCAGCTCGTCCCCGGACCGGGTGTCGATGACCCGGACGTCCCCCTCGTACTCGACGACCACCCGTCGGCCGTCGTCGCTAATGCACACCTTCTGGGAGTTGCCGCCGAGGTTCCCCGGCAGGCCGACCACGTGCCGGACCGCCCGGGCCGCCACGTCGATCAGCCACAGGACGGGCTCGACCGGGACAGCGTCGCCCGCAGCCCGGCGGACGCCAACGACCGCGAGGAGGGTTCCGTCCGGGGTGGCGGCGGCATCCTGGTAGCTTCCCTTGAGCTCGAGCTCGTGGGCCACTCGGCCGCGCTCGAGATCCCAGTACCGGACGACCACTCCCTCCCCGGCGGTCACCAGTGTCCGTCCGCCGTCGGCGAAGAACACCCGAGAGTGCCACCCGGTCTGCCGGAACTCCGTCGTCCCGATCCGCACCCCGCCGGGCGGGAGCTTCGGCTCCGCCGCGGCGGCCGGCAGGGCGGCGGGCGCGTTGCCCGGCGGCCGGGCGGGCTGGCCGGCGAGCGCTCCGGCGGCAAAAACAGCCGCGGCGGTGGCGAGCAGGGCGGCGGGTCTCAGCAGCGGCACGGGAGCCTCCGTTCGGGCGAGCGAGACGGCGGCGGGCGAGAGCCCGTCCCCGGGCGGGTCGCGCCGCCCGGGGACGGCGGCCGCCAGGAGCGCCGCGCACAGGTGCGGCGGGGCGGCCCGGAGGTCCGTCGTGAGGAGTGGGACGGCAAGGGCCGCGGACAGGTCGATGCCCCGCCGCGTGAGCCGTGCCCGCAGGCGGTCGCGAGCCCGGGCGACGCGGGCCTTCACCGCGCGCGGCGTCCACCCGAGGGCTACGGCCGCCTCGTCCTGCGTCAGCCCGTCGAAGTAGCACAGGAGGACCGCCGCCCGGAGGGCGTCCGGGAGCCGGGAGACCTCCTCGGCGAGGGCCGCGCGGACTTCGTTCCAGCTCACCTCGGCCGGGGGTTCCGGCGGGGCGACGGGTGGCGTGAGGCGGTCGGGGTCGGGAACCCGCACCGCCCGCGCCCGGGCGCGGCGGGTGATCCGGGTGGCGGTCCCGTACAGCCAACTCCCGAGGGACGCCGCGCTGCGGACCCGCCCGGCCAGGCGGGCGAGTACCAGGAACGTGGCCTGGAAGGCGTCCTCGGCGTCGGCCTCGGTACGCGCCAGCCGCCGGCACAGCGCCCACACGGCCGGGCCGTGGCGGGCGAGTAA
PROTEIN sequence
Length: 602
VVVAGGVQPAVGAEGEPGDVSLVPRGTRAERPPGLYVPRPHPVVGDRREPGAVRRPADVRRSRPADGEPADFRPGRRVYQDDGVVALRPGRPEVGHGERPPVRAERPLPRRAAGGGEAPGLPPGRDVERGHPAVGHGQEGLAVGREPGGLDPEAPDPGKRLRLRAGVPPPEEQVIPAEGDQLPVPGDGEGAGVHPALVPHQLVPGPGVDDPDVPLVLDDHPSAVVANAHLLGVAAEVPRQADHVPDRPGRHVDQPQDGLDRDSVARSPADANDREEGSVRGGGGILVASLELELVGHSAALEIPVPDDHSLPGGHQCPSAVGEEHPRVPPGLPELRRPDPHPAGRELRLRRGGRQGGGRVARRPGGLAGERSGGKNSRGGGEQGGGSQQRHGSLRSGERDGGGREPVPGRVAPPGDGGRQERRAQVRRGGPEVRREEWDGKGRGQVDAPPREPCPQAVASPGDAGLHRARRPPEGYGRLVLRQPVEVAQEDRRPEGVREPGDLLGEGRADFVPAHLGRGFRRGDGWREAVGVGNPHRPRPGAAGDPGGGPVQPTPEGRRAADPPGQAGEYQERGLEGVLGVGLGTRQPPAQRPHGRAVAGE*