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SCN18_30_10_14_R2_B_scaffold_2608_19

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(20186..20833)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XQ14_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 216.0
  • Bit_score: 133
  • Evalue 1.60e-28
Transposase {ECO:0000313|EMBL:EFL40468.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 216.0
  • Bit_score: 133
  • Evalue 2.20e-28
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 196.0
  • Bit_score: 117
  • Evalue 4.30e-24

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ACTCGGCTGCGGGTCCGGGCCGACCGCCTGGCGACGGATGCGGGAGTGGACCCGGGCCGGCGTCTGGCCGGCCGTCCACCGGCGGCTCCTGGCCCACCTCGGCCGGGCCGGGGCGGCCGACCCGTCCACCGTCATCGCCGACAGTGCGTCCTGACGGGCGGTAAAAGGGGGGCGCACACCGGGCCGAACCCGACCGACCGGGGCAAGGCCGGGTGCAAGCGGCACGCCCTGACCGACCGCCACGGCCGGCCCCTGGTGATCCACACCGGGCCGGCCAACCAGAACGACGAGGCCCGGCTGCCGGGGCTGTTGCGCGCCCTCCCGCCGGCGCCGACCGCGTCGGGCGCGGCCCGGCGGGTCCGCACGGTGCTGGCCGACGCGACCTACGGGGTGGCGTGGCTGATCGCCGTGGTGGTGGGCCTGGGGTATCGGGCGAAACTCAAGCCGCGGGGCAAGGCGGGCGAGGCCCACGGTAGCGGGTTGGGCCGCCGGCGGTATGTCGTCGAGCGGGCACTCGCGTGGGTGGCCAACGACCGCCGGTTGCGGGTCTGCTACGAGCGGACCGGGGTGAGCGGGCAAGGGTTTCATGAATTGTCCGCATGTGCCTTCTGTACCCGCCGCCTCCAGGCGAGCTGCAACGGAAATTGA
PROTEIN sequence
Length: 216
TRLRVRADRLATDAGVDPGRRLAGRPPAAPGPPRPGRGGRPVHRHRRQCVLTGGKRGAHTGPNPTDRGKAGCKRHALTDRHGRPLVIHTGPANQNDEARLPGLLRALPPAPTASGAARRVRTVLADATYGVAWLIAVVVGLGYRAKLKPRGKAGEAHGSGLGRRRYVVERALAWVANDRRLRVCYERTGVSGQGFHELSACAFCTRRLQASCNGN*