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SCN18_30_10_14_R2_B_scaffold_2112_10

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 9407..10042

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DAF similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 201.0
  • Bit_score: 189
  • Evalue 3.10e-45
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 202.0
  • Bit_score: 121
  • Evalue 2.30e-25
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29159.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 202.0
  • Bit_score: 121
  • Evalue 1.10e-24

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Taxonomy

SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGTCCCAGACCGCGTCGTCGTTGCGCACCACCGAGATGCTCGGGTTCGTCGACCGGTGGCGGGCCGGCGATCGGGCCGCGGCGAACGCCCTCATCCGCCGCACCGAGGAGCGGCTGAAGCGGATCGCCGTCCGCATGTACCGCGGGTTCCCGAACGTGCGGTCGGTCGCCGAGCCGGGCGACGTGATCCAGGCCAGCTGGATGCGCCTGTTGAAAACGCTGGAAAACCTCCGGCCCGAAAGCATGCGCGACTTCTTCAACCTCGCCGCCGTCCACGTCCGCCGCGAGCTACTCGATCTGGCCCGGCGGGCGAAGACGGTGCAGTACCGGTGCGTCTCACTGAACGCCCCGCGCCCGGGCGCAGACTCGTCGTCCGGCCTGCCGGTCCCGGAACCGGCCGACCGCACCCCCGACGACCTCGACCTGTGGGCGCGGTTCCACGAGGCGGTCGAGGAGTTGGACGCGGCGCACCGCGAGGTGGTCAGCCTGATCTTCTACCACGGCCGCACACAGCGGGAGATCGCGGCGTGGTTCGGGAAGGACGAGCGGACCATCCGCCGCTGGTGGGCCGCCGCCCTCCTGGAACTCCGAACCCGGGTCGGCGGCTCGCTCCCCGGCCGCTCACCCGAGGAGTGA
PROTEIN sequence
Length: 212
MSQTASSLRTTEMLGFVDRWRAGDRAAANALIRRTEERLKRIAVRMYRGFPNVRSVAEPGDVIQASWMRLLKTLENLRPESMRDFFNLAAVHVRRELLDLARRAKTVQYRCVSLNAPRPGADSSSGLPVPEPADRTPDDLDLWARFHEAVEELDAAHREVVSLIFYHGRTQREIAAWFGKDERTIRRWWAAALLELRTRVGGSLPGRSPEE*