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SCN18_30_10_14_R2_B_scaffold_2140_4

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(4185..5408)

Top 3 Functional Annotations

Value Algorithm Source
probable multidrug efflux pump, HlyD family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C532A similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 407.0
  • Bit_score: 517
  • Evalue 9.60e-144
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 415.0
  • Bit_score: 290
  • Evalue 4.10e-76
Uncharacterized protein {ECO:0000313|EMBL:AGP34713.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 415.0
  • Bit_score: 290
  • Evalue 2.10e-75

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
GTGAGCCACGCCGAGAACCCCGCCGAGGCCGCCCCGCGGCTCCCGTCCCGCTTCCGCCTCGGCGCGCTGGCGGTGCTCGTCGTCGCGGCCCTCGCTGCCCTCGGCACGTTCGGCGTGCGGGCGCGGGCGAAGGTCGAGGCCGACCGCGACGGGGCGGTCGCGGCGACCCGGACCGACCGCCCGCGCGTCCTCGTCACGACGGCCGCGCGTGGCCCGGCACGGGTCGAGCAGGTGCTGCCGGGCACGGCGACGCCGCGGTTCGAGACGGCCGTCCACGCCCGCACCAGCGGCTACCTGAAGCGCTGGCTCGTGGACATCGGCGACCGGGTGACGGAGGGCCAGCTCCTCGCCGAGATCGAGACGCCGGAGGTGGACTCGCAACTCCTCCAGGCGCGGGCGGCGCTGGCCGAGGCGGAGGCCGCGCTGGAGCGGGACCGGGCGAACGAGGAGCTGTCGCGGGTGAACCTCGCCCGGGTCCGGCGGGTGATCGACAACGGCGCCGGCTCGTCGCAGGACTTGGACACGGCGAACGCGGCGGCGAAGGTGGCGCGGGCGACGATCGGCGTGTCGGAGGCGACCATCGCCGCCGGCAAGGCGAACGTGAAGCGGCTCGAAGACCTCCAGAGCTACCAGCAGGTGACGGCGCCGTTCCAGGGCGTCATCACCGCCCGCAACTTCGACCCCGGCGCGCTCGTCGTCGCCGACAACGCCAGCGCGCGGGAGCTGTTCCACATCGCCCGCATCGACACGCTCCGGGTCTACGCCGACGTGCCGCAGACCTACGCGACGGGCATCCGCCCCGGGCAGCCGGCGCCGGTGTTCCGCCGCGAGGTGCCGGGCCGCGAGTTCGCCGGGACGGTCTCGCGGACCACCAGCGCCATCGACCCGGCCACCCGCACGCTCCGCGTCGAGGTGGACGTGCCGAACCCGGACCGCCTGCTCCTGCCCGGGATGTACCTCCAGGTGCGGTTCAACCTCGACGCCCCGACGGCGGTGGTGCGGGTGCCGGGGGCGGCGGTCATCACGCGCGCCGGCGGGACGAAGGTGGCGGTCGTGGACGGGTCCGGCGCGATCCGGTACAAGCCGGTGACGGTCGGCCGCGACTTCGGCACGACGGTCGAGCTGGCCGACGGGCTGGCCGGCGGCGAGACGCTCGTCATCCGCCCCGGCGACGACCTCCCCGACGGCACTATCGTCGAGCCGGTAACGCCCGCCGCCCGCTGA
PROTEIN sequence
Length: 408
VSHAENPAEAAPRLPSRFRLGALAVLVVAALAALGTFGVRARAKVEADRDGAVAATRTDRPRVLVTTAARGPARVEQVLPGTATPRFETAVHARTSGYLKRWLVDIGDRVTEGQLLAEIETPEVDSQLLQARAALAEAEAALERDRANEELSRVNLARVRRVIDNGAGSSQDLDTANAAAKVARATIGVSEATIAAGKANVKRLEDLQSYQQVTAPFQGVITARNFDPGALVVADNASARELFHIARIDTLRVYADVPQTYATGIRPGQPAPVFRREVPGREFAGTVSRTTSAIDPATRTLRVEVDVPNPDRLLLPGMYLQVRFNLDAPTAVVRVPGAAVITRAGGTKVAVVDGSGAIRYKPVTVGRDFGTTVELADGLAGGETLVIRPGDDLPDGTIVEPVTPAAR*