ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2829_2

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(721..4137)

Top 3 Functional Annotations

Value Algorithm Source
protein-export membrane protein secD n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5004 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 1164.0
  • Bit_score: 1362
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:KKN84899.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 841.0
  • Bit_score: 416
  • Evalue 9.10e-113
secD; protein-export membrane protein secD similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 478.0
  • Bit_score: 263
  • Evalue 1.50e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 3417
ATGCAACGCAACTTCCTCCGCGGGCTTCTGATCTGCTTGGTCCCGTGTGTCCTGGCGGGGCTGTACGCCTTCCAGCCGGACAAGTACCGGCTCGGCATCGACCTCGCCGGCGGGACGATCCTCGTCTACGAGGTCAACCTCGAGCGCACCCGTGAGCTGAACCAGGGGGCGAAGGACGAGGGCGGCAAGGCGCCCGCGAAGGGGGAGGCGCCGGGCCTGTCCGCCGAGGACATGACCAAGCTCGCCCACCAGATCAAGCGGCGCATCGACCCGGCGGACCTGAAGAACGTCACCGTCCGCCCGCTCGGCAACAGCCGCATTGAGATCATCCTGCCGACCGGCGGGTCGGGCGGCGGGCGGGCGAACCTGTCGGCCGAGGACATTGAGGAGGTCAAGCGGCTGGTGTCGCAGATGGGCGTGCTCGAGTTCCGCATCCTCGCCAACCAGTTCGACGACGAGGCCGGCATCCGCGCGGCCCGCGAGGTGATCGAGCAGGCCGGCCCCGAGACGCGGGCCGAGTGGGCCGTCCGCGGCAGCCCGCCGCCGCCCCCGGAGGGCGAGTTCGAGGTGAAGGCCGAGTCCGACAAGGCGCACAAGGTCCGCTACCTGTGGGCCGAGATCGGGCCGGAGGAGCGCGAGTCGCTCGGGCTCCAGAACGCGGCCGAGGGGAACTCGAAGCTCTGGACGGACATGGCGAAGGCCCGGGCCGAGGGGAAGACGTTCCTCCACAGCAGCGGCAACGAGGGGAAGCAGTACACGATGGTGCTCTACAGCCGCGAGGTGAAGAGCACGACGTGGCTGGAGCAGGAGGCGAGCGAGAAGAAGCGGCTGGAGGCCGAGGGGAAGGGGGGCGAGTTCAACCCGAAGAAGTACGAGTACTTCATCCTCACCCGCGTCTCGCCGATCGACAACGTGAAGGTCGAGGGCGACGTGTCGCTGACCGCCCAGTCGGACACCGACCCGAAGACGTTCAACCCGTGCGTCAGCTTCCGGTTCAACGGGGCCGGGGCGCAAGCGTTCGGGCGGATGACCGAGCGGAACAAGCCGGCCGGGAACACCATCCGCAACCTGGCGATCCTCCTCGACCAGCGGGTGGTGAGCGCGCCGACGCTCAACGCCGTCATCACGTCGCAGGGGCAGATCAGCGGCCGGTTCGACCGTAAGAGCGTGGACCGGCTCGTCACCATCCTGCGGAACGGGGCGCTGAACGCCCAGCTCCGCGAGAAGCCGGTGAGCGAGAACACCATCGGGCCGACGCTCGGCGCCGACACCATCCGCAAGGGGACGAGCGCCGTCGGGCTCGCGTTCCTGGCGGTGCTCGTGTTCATGGTCTTCTACTACCGCTTCGCCGGGCTCGTCGCCTGCGTCGCCCTGCTCGCGAACCTGCTCCTGACGGTCGGATTCATGGTTGCGGTGCACGCGGCCTTCACGCTCCCCGGCCTCGCGGGGCTTGTGCTCTGCCTCGGCATGGCGGTCGACGCGAACGTGCTCATCTACGAGCGCCTCCGCGAGGAGCGCGACAAGGGCGCGAACCTCGCCACCGCCATCCGCAACGGGTACGAGCGGGCGTTCCTCACGATCATCGACACCCACCTGACGAGCATCTTCACCGCGATCGTGCTCTACACGTTCGGGAACGACCAGCTGAAGGGGTTCGCCATCAGCCTCACGGTCGGGCTGATCATCAGCCTGTTCACGTCGCTGTACATGACGCGGCTGATCTTCGACTACTGCCTGACCAAGCGGCTGTTGACCGAGCTGCGGATGATGCGGCTGTTCAGCCGGCCCAACGTCCACCCGATGAAGTACCGCTGGTTCTTCCTGCCGTTCACGGCGGCCCTTACGGTCCTCGGCGTGGCGCTGTTCGCCTACCGCGGCGACGCCGGGCTGAACGTCGACTTCCGCGGCGGCACGGTGTACGCCGGCAAGCTGAAGGACGGCGAGGAGCGGGCGCTGACGACCGTGGACGGCCAGTCCGGCCTCCGCGAACTCCTGGCGGACACGGCGAAGCTCAAGGTGTCGGACGTGCGGTGGGTGAACAAGCCGGCGCCGGGCGCCGACGTCGCGGCGCTGGGCGTCTACGTGTTCGAGATCACCTACGCCGACGGCGCCACCACCACCGTCTCACTCACCCAGAAGCCGGCCGGGGCCGACGCGAAGGAGATGGAGGCGGCCGTCGCCAAGCGGGCGTCGGAGTTCCCGGACGTGTCGATCGAGCAGATGTTCCTCTCCGGGCAGACGTTCCCCGGCGGGCGGAGCCAGTACTTCACCGTCCGCACCACCGAGCGCCAGCCGGACCTCGTGCGGGCGAGCCTCGACCGCCTCCTGCGCAACGCCAAGGGCGAACAGCTGGTGGCAAGTCCCGACATGACCACCGGACCGGTGACCGGGCCGGTCGTGGATCTCTCGTTCGACCGGCCGACCTCCCCGAGCCAGTTCCGCAACCTGCTGGAGCAGCGGTTCCGGGCCGAGAACGCGGTCGACCCGGCCGGGTACCTGTTCGATCTGACCGGGGTCGGCGAGGCGGAGGGCGGGCGCTTCTCGCGGCTGCGGCTCGACGTGGCCAAGAACACCAACTTCGCCGCCCTCAGGACCGCGGCCGCTGTGACCACGGCGACCAGCCCGGCGGGCGTCGCCCTCGCGGGGGGACCAGTCGCCATCGGCGTCGCCGCCACGGCGGATGCCAAACAGGCCGAGGCCGAGGCGGCATCGCTCCGGGGGATGCTCGCGGCCGTTGAGCGGGCGGTGGAGACGAGGCCCGAGCCGGAGCGGCTGGAGGTGTTCGACAGCCAGCTCGCCGCCGAGACGCGGACCAAGGCGTTCTACGCCATCCTCGCCAGCTGGGTGGCGATCCTGCTGTACCTCTGGTTCCGGTTCGGGAACTGGACGTTCGGCCTGGCGGCCGTGTTGTGCCTGGTCCACGACCTGTGCTTCACCCTCGGCATGATCGCCGCCGGGCACTACCTCCACCTGATCCCGGGGGCGAGCGTGCTCGGGATCGAGGACTTCAAGATCGACCTCGCCGCCGTCGCCGCCCTGCTCACCCTGGTCGGGTACTCGGTGAACGAGATCATCGTGAACTTCGCCCGCATCCGCGAGGTACGCGGGAAGAGCCCGAACCTGACCCCGCAGATGATCAACGACAGCGTGAGCCAGACGCTGAGCCGCACGATCCTGACGTCGATGACCGTGCTCCTGGTGTCGCTCGTTCTGTACATCTTCGGCGGCGAGGGCGTCCACCTCTTCGCGTTCGTGATGGTGATCGGCGTACTCGTCAGCACGTACAGCTCGATCTTCGTGGCCGCCCCGCTGCTGCTGATCTTCGGCGAGGGGCACCACGAGCTCGCATCCGAGGAGGCGGCCGCCGAGAAGACCGAGGAGGGGAAGGACAAGGAGGAGGAAGTGGTCGAGGGCTGA
PROTEIN sequence
Length: 1139
MQRNFLRGLLICLVPCVLAGLYAFQPDKYRLGIDLAGGTILVYEVNLERTRELNQGAKDEGGKAPAKGEAPGLSAEDMTKLAHQIKRRIDPADLKNVTVRPLGNSRIEIILPTGGSGGGRANLSAEDIEEVKRLVSQMGVLEFRILANQFDDEAGIRAAREVIEQAGPETRAEWAVRGSPPPPPEGEFEVKAESDKAHKVRYLWAEIGPEERESLGLQNAAEGNSKLWTDMAKARAEGKTFLHSSGNEGKQYTMVLYSREVKSTTWLEQEASEKKRLEAEGKGGEFNPKKYEYFILTRVSPIDNVKVEGDVSLTAQSDTDPKTFNPCVSFRFNGAGAQAFGRMTERNKPAGNTIRNLAILLDQRVVSAPTLNAVITSQGQISGRFDRKSVDRLVTILRNGALNAQLREKPVSENTIGPTLGADTIRKGTSAVGLAFLAVLVFMVFYYRFAGLVACVALLANLLLTVGFMVAVHAAFTLPGLAGLVLCLGMAVDANVLIYERLREERDKGANLATAIRNGYERAFLTIIDTHLTSIFTAIVLYTFGNDQLKGFAISLTVGLIISLFTSLYMTRLIFDYCLTKRLLTELRMMRLFSRPNVHPMKYRWFFLPFTAALTVLGVALFAYRGDAGLNVDFRGGTVYAGKLKDGEERALTTVDGQSGLRELLADTAKLKVSDVRWVNKPAPGADVAALGVYVFEITYADGATTTVSLTQKPAGADAKEMEAAVAKRASEFPDVSIEQMFLSGQTFPGGRSQYFTVRTTERQPDLVRASLDRLLRNAKGEQLVASPDMTTGPVTGPVVDLSFDRPTSPSQFRNLLEQRFRAENAVDPAGYLFDLTGVGEAEGGRFSRLRLDVAKNTNFAALRTAAAVTTATSPAGVALAGGPVAIGVAATADAKQAEAEAASLRGMLAAVERAVETRPEPERLEVFDSQLAAETRTKAFYAILASWVAILLYLWFRFGNWTFGLAAVLCLVHDLCFTLGMIAAGHYLHLIPGASVLGIEDFKIDLAAVAALLTLVGYSVNEIIVNFARIREVRGKSPNLTPQMINDSVSQTLSRTILTSMTVLLVSLVLYIFGGEGVHLFAFVMVIGVLVSTYSSIFVAAPLLLIFGEGHHELASEEAAAEKTEEGKDKEEEVVEG*