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SCN18_30_10_14_R2_B_scaffold_2869_2

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2861..3466)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4ECD similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 207.0
  • Bit_score: 275
  • Evalue 3.10e-71
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 183.0
  • Bit_score: 171
  • Evalue 1.40e-40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB18699.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 183.0
  • Bit_score: 171
  • Evalue 6.90e-40

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Taxonomy

CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → Acidobacteria

Sequences

DNA sequence
Length: 606
ATGGCCCAGCCCGGCCCGACTCCGAGCGACCGGCCGGTCCCGCCTCCCCCGTCACCCGCCGGGGCCGAGCCCGCCCGCTTGGACGACGACGCCCTGGTCGCCCTGTTCAACCAGATCCGCGACGAGCTGGTCAGTACGCTCCTGTACGTGATCGGCAACGCGGACGACGCCCAGGATGCCGCCCAGGAAGCGTTCCTCAAGTGCTGGCGCAGCCGGCACACGATGGGCGACGTCCAGAACGTCCGGGCCTGGATCTTCCGGATCGGGCTGAACGCCGCCAAGGACCACCAGCGGAGCGCGTGGAAGCGGAAGTCCCGCCCGCTCCCGGACGACGACCTGATGAGCCCGGCCCGGGACGGCCCGCCCGGCGAGTCCCTGGAGGACCGCGAGACGGTCGGCCGGCTCCGCGAGGCGCTGACGAACTTGCGGCCGGAGGAGCGCGAGGTGTTCCTCCTCCGGCAGAACGGCGAGCTCACCTACGAGCAGATCGCCGAGCTGCGCGGCGCCCCGGTCGGCACGGTGAAGACGCAGATGCGGGCCGCCCTCCAGAAGCTCCGCAAGGTGCTCAACCCGGGGGCGGCCGACGACCAGCCCGGTGCGGATTGA
PROTEIN sequence
Length: 202
MAQPGPTPSDRPVPPPPSPAGAEPARLDDDALVALFNQIRDELVSTLLYVIGNADDAQDAAQEAFLKCWRSRHTMGDVQNVRAWIFRIGLNAAKDHQRSAWKRKSRPLPDDDLMSPARDGPPGESLEDRETVGRLREALTNLRPEEREVFLLRQNGELTYEQIAELRGAPVGTVKTQMRAALQKLRKVLNPGAADDQPGAD*