ggKbase home page
Advanced Search
Search Help

SCN18_30_10_14_R2_B_scaffold_2253_10

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(13199..17197)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
IMP dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5108 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 1152.0
  • Bit_score: 1867
  • Evalue 0.0
Transglutaminase {ECO:0000313|EMBL:ENO74723.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 1172.0
  • Bit_score: 1457
  • Evalue 0.0
transglutaminase-like domain protein similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 1132.0
  • Bit_score: 1438
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3999
ATGGGCATCCGCGTCGCGCTGTCGCACGTCACCACGTACCGCTACGACCGGCCGGTGATCCTCGGCCCGCACACCGTCCGACTCCGCCCGGCACCGCACGCGCGCACACCGGTTCACGCTTACTCGCTCCGCGTCGAGCCAGCCGACCAGTTCCTCAACTGGCAGCAAGACCCGTACGGCAACTACCTCGCCCGTCTCGTTTTCCCCGAGCCGGCGACCGAGCTCAAGGTCACGGTCGAGCTCGTCGCCGAACTCGTCCCGATCAACCCGTTCGACTTCTTCATCGACGAGGCGGCGGAGAAGCACCCGTTCGCCTACGACGAGACGCTGACGCGCGAACTCGCCCCGTACCTCGAAACGCTCCCCGCCGGCCCGCGGCTGCGCGAGCTCATCGCGTCGTGCCGGCAGAGCGGCGTGCGCACGGTCGATTACCTCGTCGCGCTGAACCAAGCGGTGCAGCGGCACGTCGGCTATGTCATTCGCATGGAACCGGGCGTGCAGACGCCGGAAGAGACGCTCGACTTCCGCCGCGGGTCGTGCCGTGACTCGGCGTGGCTACTCGTGCAACTCGCCCGCCACCTCGGCCTCGCGGCGCGGTTCGTGTCCGGCTACCTCATCCAGCTCGTCGCCGACGAGCGGCCGATCGAGGGGCCGGAAGGCCCGCCGGCCGACTTCACCGACCTGCACGCCTGGGCGGAAATCTACGTGCCCGGCGCGGGCTGGATCGGCCTCGACCCCACGTCCGGGTTGCTCGCGGCGGAGGGGCACATCCCGCTCGCCAGCACCGCCGACCCGCAGACCGCGGCGCCGATCAGCGGGTCGTACTCGTGGACCAAGCGCGGCGACGACGACAAGGTGGAAGAGGGCTTCGACTTCCACATGCAGGTCACGCGGCTGAACGAGAAGCCGCGCGTCACGAAGCCGTACACGGACGAGCAGTGGTCGGCGATCGACGCGCTCGGCCGGCGCGTGGACGCCGACCTGCGCGAGTGGGACGTGCGCCTCACGATGGGGGGCGAGCCGACGTTCGTGAGCATCGACGACCGCGACGCGGACGAGTGGAACACCGCCGCCCTCGGCCCGAACAAGCGCCGGCAGGCGGTGACGCTGTTGAAGCGGCTGCGCGACCGGTTCGCCCCGCGCGGTTTGCTCCACTTCGGGCAGGGGAAGTGGTACCCCGGCGAGCAGCTGCCGCGCTGGGCGCTCGGCTGCTGGTGGCGGCGCGACGGCGAGCCGGTGTGGACCGACCCGGCGCTCGTCGCCGACGAGCAGGTGCGCTACGGGTTCGGCCCGAACGAGAGTGGTCGGTTCGTCACGCGGCTGGCGGAAATCCTCGGCGTGAACCCCGGCTACGCGCTGCCCGGCTACGAGGACGCCTGGTACTACCTGTGGCGCGAGCGGCGGCTGCCGGCGAACGTGGACCCGTTCGACAGCAAGCTCGACGACGAGCAGGAGCGCGCCCGCCTCGCCCGCGTGTTCGAGCAGAAGCTCGGCACGGTCGTCGGCCACATGCTGCCGGTCCGCCGCGCGTTCGGCCCGGGGTCGAAGTGGGAGAGCGGCAACTGGTTCCTGCGCAAGGAGCGGATGTACCTGCTCCCCGGCGACAGCCCGATGGGCTTCCGCCTCCCGCTCGACGGCGTGTACTGGGAAGACCCGTCGGCCCGCCAGTTCATGGCCGAGCGCGACCCGTTCGCGCCGCGCGGCCCGCTGCCGCCGCGGGCATACAGCTACGCCGACGGGGGCCGCGCGCCTGAGTTGCAATTCCAGCACGAGCCGCGCTTCCGCCACGACGGCTGGGGCCTGAACGGCGATGGCCGCGCCCGTTCGCCGCTCGGGGCCCGGCCGACCGGTCCCGACTCCGAGTACGACCCGTCGATCGTCCGCACCGCGCTGTGCGTCGAGCCGCGTGGTGGAGTGATGCACGTGTTCATGCCGCCGATCCGCGTCGCGGAGGACTATCTCGACCTCGTGACGGCGATCGAGCAGACCGCCGCCGAGCTCGGCGTGCCGGTGTTGATCGAAGGCTACAAGCCGCCGCACGACCCACGGCTGAACCACTTCTCGGTCACGCCCGACCCGGGCGTGATCGAGGCGAACATGCACCCGGCCGAGAGCTGGGACGAGCTCGTCCACATTACGACGACGCTGTACGAGGAGGCGCGGCAGAGCCGCCTCTGCACCGAGAAGTTCATGCTCGACGGCCGCCACACCGGCACCGGCGGCGGGAACCACGTCGTCCTCGGCGGCGCCACGCCGTCGGATTCGCCGCTCCTGCGCCGCCCGGACCTGCTCAAGAGCCTCGTCGGCTTCTGGGTGAACCACCCGAGCCTGTCGTACCTGTTCAGCGGGCTGTTCGTCGGGCCGACGAGCCAGCACCCGCGCGTGGACGAGGCGCGACACGACGCCCTCCGCGAACTGGAACTAGCGTTCGAGCAGGTGACGGCGAACCGCGGCGAGCACGTGCCGGCGTGGCTGGTCGACCGCCTGTTCCGCCACCTGCTCACCGACTCGACCGGCAACACGCACCGCACCGAGTTCTGCATCGACAAGCTGTTCAGTCCCGACACGGCGAGCGGCCGGCTCGGGCTGCTAGAGCTCCGCTCGTTCGAGATGCCGCCGCACGCCAGCATGAGCCTCGCGCAGCAGGTGCTCCTGCGCTCGCTCGTGTCGTGGTTCTGGCGAAAGCCCTACGACAAGAAGCTCGTCCGCTGGGGGACCGCGCTGCACGACAAGTTCATGCTCCCGCACTTCGTCGAGGAGGACTTCCACGACGCGCTCGGCGAGCTCGGCGACCGCGGCGGGTACGCGCTCGACCCGGCGTGGTTCGCCCCGCACGTCGAGTTCCGCTTCCCGGTGCTCGGCGAGGTGACGCGCCGTGGGGTGAACCTGGAGCTCCGAACGGCCATCGAGCCGTGGCACGTCCTCGGCGAGGAGGGGGCGCCCGGCGGCACGGCGCGCTACGTCGATTCGTCGGTCGAGCGGGTGCAGGTGAAGGTGCGCGGGCTGACCGACCCGCGCCACGTCGTGACGTGCAACGGTCGCCGGGTGCCGCTCCACCCGACGGGGACGAACGGCGAGTTCGTCGCCGGCGTGCGCTACCGGGCGTGGCAGCCGCCGAGCTGCCTCCACCCGACAATTCCGGTCCACGCCCCGCTCGTGTTCGACGTGCTCGACACCTGGAACGACCGTAGCGTCGGCGGCTGCACGTACCACGTGTCGCACCCGGGCGGACTGTCGCACGAGCGGCTGCCGGTGAACGGGCTCGAGGCCGAGAGCCGCCGCATCGCCCGCTTCTTCGCGCTCGGCCACACGCCCGGCCCGGTGAACGCGCCGCCGGCCGAGGGGAGCCCCGAGTTCCCGCTGACGCTCGACCTCCGCACCGCCGAGCCGCCGCGCTACCGGGCGCCGGTCACGTCGGTGGAACCAGCGCCGCGCCGGATGGCGGAGAGCGTGATCAAGACCGGCCACGGACAGATCAAACTCCTGGTTCTGATCCGTGTTTCATCCGTGTTCATCCGTGGCCGGTTTGGGACTGCCACCGGTCGCGTCAGTGGAACCGTCGCTGCAGCGACGCACCGCGGCGGGTGTGGTAGACTGACGGTGAAGGATTTTGGACTCGGGATTCAGGAGCGAGCCCGACCCGCCGCCACCGCGAACCCCCGGGCCGATGTCTGCCGCGAATCCCGAATCCCGACCCCCGAACCCTCTCCAGTACGCGCCGCCGGCCGGGTTCGACGAGGCCGCCGACGGCGCCGCCCACCCGCGGGCGCACTGGCAGACGTTCTTCCGCGCCCTCGACGACCTCGGCCCGGCCGAGCTCGGCCGCCGCTGGCGCGACGCCCAGCACCTCATCCGCGAGAACGGCGTCACGTACAACGTGTACGGCGACCCGCGCGGCATCGCCCGCCCGTGGCAGCTCGACCCGATCCCGCTCCTCATCGCCCCCGGCGAGGCCGCCCGCCTCGAAGCCGGTTTGCTCCAGCGCGGGCGACTCCTTGA
PROTEIN sequence
Length: 1333
MGIRVALSHVTTYRYDRPVILGPHTVRLRPAPHARTPVHAYSLRVEPADQFLNWQQDPYGNYLARLVFPEPATELKVTVELVAELVPINPFDFFIDEAAEKHPFAYDETLTRELAPYLETLPAGPRLRELIASCRQSGVRTVDYLVALNQAVQRHVGYVIRMEPGVQTPEETLDFRRGSCRDSAWLLVQLARHLGLAARFVSGYLIQLVADERPIEGPEGPPADFTDLHAWAEIYVPGAGWIGLDPTSGLLAAEGHIPLASTADPQTAAPISGSYSWTKRGDDDKVEEGFDFHMQVTRLNEKPRVTKPYTDEQWSAIDALGRRVDADLREWDVRLTMGGEPTFVSIDDRDADEWNTAALGPNKRRQAVTLLKRLRDRFAPRGLLHFGQGKWYPGEQLPRWALGCWWRRDGEPVWTDPALVADEQVRYGFGPNESGRFVTRLAEILGVNPGYALPGYEDAWYYLWRERRLPANVDPFDSKLDDEQERARLARVFEQKLGTVVGHMLPVRRAFGPGSKWESGNWFLRKERMYLLPGDSPMGFRLPLDGVYWEDPSARQFMAERDPFAPRGPLPPRAYSYADGGRAPELQFQHEPRFRHDGWGLNGDGRARSPLGARPTGPDSEYDPSIVRTALCVEPRGGVMHVFMPPIRVAEDYLDLVTAIEQTAAELGVPVLIEGYKPPHDPRLNHFSVTPDPGVIEANMHPAESWDELVHITTTLYEEARQSRLCTEKFMLDGRHTGTGGGNHVVLGGATPSDSPLLRRPDLLKSLVGFWVNHPSLSYLFSGLFVGPTSQHPRVDEARHDALRELELAFEQVTANRGEHVPAWLVDRLFRHLLTDSTGNTHRTEFCIDKLFSPDTASGRLGLLELRSFEMPPHASMSLAQQVLLRSLVSWFWRKPYDKKLVRWGTALHDKFMLPHFVEEDFHDALGELGDRGGYALDPAWFAPHVEFRFPVLGEVTRRGVNLELRTAIEPWHVLGEEGAPGGTARYVDSSVERVQVKVRGLTDPRHVVTCNGRRVPLHPTGTNGEFVAGVRYRAWQPPSCLHPTIPVHAPLVFDVLDTWNDRSVGGCTYHVSHPGGLSHERLPVNGLEAESRRIARFFALGHTPGPVNAPPAEGSPEFPLTLDLRTAEPPRYRAPVTSVEPAPRRMAESVIKTGHGQIKLLVLIRVSSVFIRGRFGTATGRVSGTVAAATHRGGCGRLTVKDFGLGIQERARPAATANPRADVCRESRIPTPEPSPVRAAGRVRRGRRRRRPPAGALADVLPRPRRPRPGRARPPLARRPAPHPRERRHVQRVRRPARHRPPVAARPDPAPHRPRRGRPPRSRFAPARATP*