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SCN18_30_10_14_R2_B_scaffold_2253_16

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(23018..24019)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 333.0
  • Bit_score: 461
  • Evalue 7.20e-127
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4717 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 335.0
  • Bit_score: 567
  • Evalue 8.70e-159
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 333.0
  • Bit_score: 461
  • Evalue 1.50e-127

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1002
ATGCGGGTACGCTGGCGCGGGCTCGAGCTGCCGAACCGGGTGACCTCGGACCGGGCGACGCTCACCGACACCTACGGCAAGTTCTACATCGAGCCGTTCGAGCGCGGGTTCGGGATGACGCTCGGGAACTCCCTGCGGCGCATCCTGCTGTCAAGCCTCGAAGGCTCGGCGGTCACGCGGGTCAAGATCCAGGGCGTGCAGCACGAGATCTCGACGATCAACGGCGTCGTCGAGGACGTGACCGACATCCTGCTGAACGTGAAGAGCCTGGTCGTCAAGAACGTCAGCGACCAGCCGAAGGTGGTGCGCATCCAGAAGCACGAGGCCGGGGTCGTCCGCGGGGTGGACATCCAGCACGACGAGACGGTGCAGATCATCAACCCCGAGCACCACCTGGCGACGCTCACCGCCGACGTACCGTTCGGCGTCGAGATGACGGTCGAGAACGGCCGCGGGTACAAGACCGCCGACGAGAACGCCGGCAAGGAACGCGAGATCGGCGTCATCCCGGTGGACAGCTCGTTCTCCCCGGTCGTGCGGGTGAAGTACGACATCGAGGAGACTCGCGTCGGCCAGAAGACGAACTACGACCGCCTCGTCATCGAGATCTGGACGAACGGCACCGTAGGCCCGCAGATGGCCCTCGTCGAGGCGGCGAAGATCCTGCGGAAGCACCTGAACCCGTTCGTGCAGTACACCGAGCCGGGGCCGGAGGTGCCGCTGGACGAGGCCATCGAGGTGGGCGGCAGCCCGCAGCGAGAAGCCGGCGACGCCGAACTCGAGCGCAAGCTGAACATGAGCCTCGCCGAGCTGGAACTCTCGGTGCGGGCGACGAACTGTCTCGAAACCGAAGGCATCACCACCGTCCGGGAGCTGGTGATGCGGGCCGAAGACGAACTGCTCGAGGTTCGTAACTTCGGCGAGACGACCCTGCGCGAGGTGAAGGCCAAGCTCCAGGAGCGCGGCCTGTCGCTCGGGATGAAGCTCCCGACCCGCCGCTAG
PROTEIN sequence
Length: 334
MRVRWRGLELPNRVTSDRATLTDTYGKFYIEPFERGFGMTLGNSLRRILLSSLEGSAVTRVKIQGVQHEISTINGVVEDVTDILLNVKSLVVKNVSDQPKVVRIQKHEAGVVRGVDIQHDETVQIINPEHHLATLTADVPFGVEMTVENGRGYKTADENAGKEREIGVIPVDSSFSPVVRVKYDIEETRVGQKTNYDRLVIEIWTNGTVGPQMALVEAAKILRKHLNPFVQYTEPGPEVPLDEAIEVGGSPQREAGDAELERKLNMSLAELELSVRATNCLETEGITTVRELVMRAEDELLEVRNFGETTLREVKAKLQERGLSLGMKLPTRR*