ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2523_6

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(5909..6250)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003045D7A similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 99.0
  • Bit_score: 107
  • Evalue 4.90e-21
Marine sediment metagenome DNA, contig: S03H2_S09216 {ECO:0000313|EMBL:GAH68960.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 96.0
  • Bit_score: 105
  • Evalue 2.60e-20
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 69.0
  • Bit_score: 55
  • Evalue 8.10e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAAGACCCCAACCCCCATGACCAAGTCCCCGCGGGTCGTCGCCCGGGAGACACTCGCCCTCGCCCGGGAAGCCCTGCCGACCTACACGTCGGCCCGCAGCCGGAAGGACTTCACCGCCCACCAGCTGTTCGCCGTCCTCGCCCTCAAGACGTTCTTCAAGACCGACTACCGGGGCATCGTCCAACTCCTCACCGACTTCGCCGACCTCCGCAAGGACCTCGGGCTGGAGAAGGTGCCCCACTTCTCCACCCTCTGCTACGCGGCCGGCCGGCTGCTCAAAAAGGGGGGGCCGTCAGCCTCCTCGACCGCGCCACTACGTCCGCGACCCGCCGCGGCCTGA
PROTEIN sequence
Length: 114
MKTPTPMTKSPRVVARETLALAREALPTYTSARSRKDFTAHQLFAVLALKTFFKTDYRGIVQLLTDFADLRKDLGLEKVPHFSTLCYAAGRLLKKGGPSASSTAPLRPRPAAA*