ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3127_1

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(32..343)

Top 3 Functional Annotations

Value Algorithm Source
two component transcriptional regulator, winged helix family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C506D similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 94.0
  • Bit_score: 111
  • Evalue 4.00e-22
Marine sediment metagenome DNA, contig: S01H1_S39309 {ECO:0000313|EMBL:GAG45443.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 98.0
  • Bit_score: 92
  • Evalue 2.10e-16
cusR; transcriptional regulatory protein CusR similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 100.0
  • Bit_score: 91
  • Evalue 1.20e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Gemmatimonadetes_22x → CN-SCN_Gemmatimonadetes_22x → CN-SCN_Gemmatimonadetes_22x → CN-SCN_Gemmatimonadetes_22x → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 312
ATGACTGCCGAGGACGTTGAGGTCGATTTCGCCTCCCGGACGGTGCGACGTGCGGGCCGGGATGTCCCGCTGACCCGAAGCGAGTACGCGCTGTTCGAGATTCTGTTCCGGCGCCGGGGGAGTGTGGTGACCCGGGCCGCGATCTGGGAGCACCTCTACGACGAACCGCCGGACTTCACCTCGAACGTCATCAACGTGCTGATCCGCTCCCTGCGGAGAAAAATCGACCGGGACTGTAGCCCGCCCCTGATCCTGACCAGCAGGGGCGAGGGCTACCAGATGCGGGCCGCCGAGACCGCGGTCCCGGTTTGA
PROTEIN sequence
Length: 104
MTAEDVEVDFASRTVRRAGRDVPLTRSEYALFEILFRRRGSVVTRAAIWEHLYDEPPDFTSNVINVLIRSLRRKIDRDCSPPLILTSRGEGYQMRAAETAVPV*