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SCN18_30_10_14_R2_B_scaffold_3127_4

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 2245..2841

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C63 similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 191.0
  • Bit_score: 277
  • Evalue 6.20e-72
RNA polymerase sigma-E type, Rhodopirellula baltica {ECO:0000313|EMBL:EMI55351.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 194.0
  • Bit_score: 141
  • Evalue 7.50e-31
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 182.0
  • Bit_score: 135
  • Evalue 1.40e-29

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGGAGACCAGGCCGCCGCTGAGGCCCGCCGACGCCTACGTCGACTACCTCCGGCTGCTTGCCCGGCTGCGCCTCCTCCCGCAGTTGCGGGGGAAGCTCGACCCCTCCGACGTGGTACAGCAGACGCTCCTCCAGGCCCACGCGGGGCGGGACCAGTTCCGCGGGCGCTCCGAGGAGGAGTGGGTGGCGTGGCTCAGGGCGATTCTGGCCAACGTCATGACCGGGGCGCTCCGGGCCTACGGTGCGGCCGCCCGGGACGTCGGCCGCGAGTGGTCGATCGACGCCGGGGTCGACGCGTCCGCCTCGCGGGTGGAACAGTGGCTGGCGGCCGAGCAGTCGTCCCCCAGTCAGCGCGCGTCCCGGCACGAGCAACTGCTCCGGCTGGCCGCGGCCCTGGCCCAACTGCCCGACGACCAACGAGAGGCAGTCGAGCTGCACCACCTGAAAGGGCACACGGTGGCGAAGGTCGGCGAACTCATGGGGAAGTCCCGGCCGGCGACCATGGGGCTGATCTACCGGGGCCTGCAACGGCTACGGGTGCTCCTCCAGGCCAGGGAGGACGGGGATGGCGACCAACGGGCAGACGACGGACAGTGA
PROTEIN sequence
Length: 199
METRPPLRPADAYVDYLRLLARLRLLPQLRGKLDPSDVVQQTLLQAHAGRDQFRGRSEEEWVAWLRAILANVMTGALRAYGAAARDVGREWSIDAGVDASASRVEQWLAAEQSSPSQRASRHEQLLRLAAALAQLPDDQREAVELHHLKGHTVAKVGELMGKSRPATMGLIYRGLQRLRVLLQAREDGDGDQRADDGQ*