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SCN18_30_10_14_R2_B_scaffold_2952_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(3076..5085)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4345 similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 361.0
  • Bit_score: 197
  • Evalue 3.60e-47
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 302.0
  • Bit_score: 218
  • Evalue 2.10e-53
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 353.0
  • Bit_score: 196
  • Evalue 2.30e-47

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2010
GTGTTCCCGCTCCTGCGTCGCATCGCCGCCGACCGGCGGGCGGCCGCGGCCGCCGACCACGACCTGCTCCGGCGGTTCGCCGACGGGCGGGACGAGGCGGCGTTCGAGGCCGTCGTCGCCCGCCACGGGGCGATGGTGTTCGAGGTGTGCCGCGGCGTGCTGGGCGGCGACACCGACGCCGAGGACGCCTTCCAGGCGACGTTCGTCGTCCTCGCCACGCGGGCCGGGGCGGTCCGCCGGTCGGAGTCGCTCGCGGCGTGGCTCCACGGCGTCGCATACCGGGTAGCGCTGAAGCTGCGGGCCTCGCTCGCCCGCCGGCGCGCGGCCGAGGCGTCCGCGCCGCCGCGTCCGGCCGACGATGCGGACGCGCTCGCCTGGGCCGAGGTGCGCTGTGTGCTACACGAGGAGCTCGGCCGGCTCCCCGACCGCTACCGGGGGCCGCTCGTCCACTGCTACCTCCGCGGACAGACGCAGGACGAGGCGGCGGCCCTGCTCGGGCTGTCGAAGGGGACGCTGAAGCGACGTCTGGAGGGCGGCCGGGCGCGGCTGCGCGACCGGCTCGTCCGCCGCGGGCTCGGCCCGTCCGCCGTCCTCGTGTGCGCCGCCTGGCCGACCGGCCCCGCCACCGCCGCCCCGGCGGCGCGGCTGGTGTCGTCCGCCCTGCTCTACCTGTCTGCCCCGAATCGAATCCCGGACCGCGTCGCCTCCCTCGCCACCGGAGTCCTCACCGCCATGCGCGTCGCGCACCTGAAGACCGTCACGGCCGCCGTCCTCCTCGGCGTGTGTGTCCTCGTCGGCACCGGCGCCGCTCTCGGTCGCCTGGGTGCCCCCGAACCGGCGCCGGCCGATCCGGCCCCGCGGGCGGCGCCCCAGCCGGCGCCACAGCCCGTTCGGCCGAAGGCGCCGACGCTCGCGGACGGAGTGACCCAGATGAAAATCGCACGCTACTTCGACGAGAAGGTCACGGCGAGCCGGGCCGAGAAGGTGATCGACGACAAAACGGCGATCGCCGACGTGCTCGCCCTCTTCCCCGGGATTGCGACGAGCAAGCGGCCGGATGCGGCGGCCCCCGGCGGCGGGTCGCGCGGGTACAGCGCGGCCTACGTCATCTCGTTCACCCGCGCGAAGGGCGAGCCGCTGCACGTCGTGATCAGCCACCAGCGCACCTGGTGGTGCTGGTCGCAGGGCACCACCGTCTCCAACGGGGACTGGAACCTGAAGAACGCGAAGGCCGTGTGCCGGCGCCTCGACGAACTGCTCGACGCGCCGGCGGCCGGCGGGAAGCTCGAACTCCGCCGGCTGAAGCGGGACAAGGCCGGACCGGGATACACGCCGGTCGTGACCGTGACGGACGGCAAGGCGCTCGCCGAGTTCCTGACCCTGTTCCCCGGCCTCGGCGAGGACCGGCCGCACGTCCCGTCGGGGCGCGGCGGGTTCGACACGTACCGCGTCGTCTACCACCCCGAGAACGGCGGCCCGATCGACGTCGGCGTCCTCATCGACAACGACCTGGCCGTCTGGCACTGGTCGCGCGGGAAGACCGGCTCGGACGGCGACCGGCGGGTGGCGGACCCGAAGCGGGTGGCGGCGTTCCTCGACGGCCTCGTCGACGCGCCGCACCCGCTCGCGCCCCAGGTCGAGAAGATGGAAGTCCTCCGGCGGTTCAACGCGCGGGGGGAACTGGTCCCACTTGCGAAAACGGTGACGACGGACGAGCGGCACGTCGCCCGGGTACTCGCGCTGTTCCCGGAGGTGGGCACCGACCGGGAACCGGACGCCCACCTCCCCGGCGGCGGCGGCGGCGCCCGGCTCTACGGCACGGGCTGCGCGGTGACGTTGCACCTCAAGCGGGGTAGCCCGGTCACCATCGTCGTCAGCAGCGACCGCCAGTTCTGGTGTTGGGCGCGGGGGAGCGAGCGGTCGAACGGCGACTGGCGCTTCACCCGGACGCGGGAAGTGGAGGCGTTCCTGGACGAAATCCTCGTTCCGCTCGCGGCCCGGGAGCGGTAA
PROTEIN sequence
Length: 670
VFPLLRRIAADRRAAAAADHDLLRRFADGRDEAAFEAVVARHGAMVFEVCRGVLGGDTDAEDAFQATFVVLATRAGAVRRSESLAAWLHGVAYRVALKLRASLARRRAAEASAPPRPADDADALAWAEVRCVLHEELGRLPDRYRGPLVHCYLRGQTQDEAAALLGLSKGTLKRRLEGGRARLRDRLVRRGLGPSAVLVCAAWPTGPATAAPAARLVSSALLYLSAPNRIPDRVASLATGVLTAMRVAHLKTVTAAVLLGVCVLVGTGAALGRLGAPEPAPADPAPRAAPQPAPQPVRPKAPTLADGVTQMKIARYFDEKVTASRAEKVIDDKTAIADVLALFPGIATSKRPDAAAPGGGSRGYSAAYVISFTRAKGEPLHVVISHQRTWWCWSQGTTVSNGDWNLKNAKAVCRRLDELLDAPAAGGKLELRRLKRDKAGPGYTPVVTVTDGKALAEFLTLFPGLGEDRPHVPSGRGGFDTYRVVYHPENGGPIDVGVLIDNDLAVWHWSRGKTGSDGDRRVADPKRVAAFLDGLVDAPHPLAPQVEKMEVLRRFNARGELVPLAKTVTTDERHVARVLALFPEVGTDREPDAHLPGGGGGARLYGTGCAVTLHLKRGSPVTIVVSSDRQFWCWARGSERSNGDWRFTRTREVEAFLDEILVPLAARER*